Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.25■□□□□ 0.67
BdnfP21237 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BdnfP21237 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BdnfP21237 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
BdnfP21237 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.24■□□□□ 0.67
BdnfP21237 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BdnfP21237 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
BdnfP21237 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BdnfP21237 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BdnfP21237 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
BdnfP21237 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
BdnfP21237 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BdnfP21237 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BdnfP21237 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BdnfP21237 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BdnfP21237 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BdnfP21237 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BdnfP21237 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
BdnfP21237 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BdnfP21237 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BdnfP21237 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
BdnfP21237 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
BdnfP21237 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BdnfP21237 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BdnfP21237 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BdnfP21237 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BdnfP21237 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
BdnfP21237 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BdnfP21237 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BdnfP21237 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.22■□□□□ 0.67
BdnfP21237 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
BdnfP21237 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BdnfP21237 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BdnfP21237 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BdnfP21237 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
BdnfP21237 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BdnfP21237 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
BdnfP21237 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BdnfP21237 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BdnfP21237 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BdnfP21237 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BdnfP21237 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
BdnfP21237 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.21■□□□□ 0.67
BdnfP21237 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
BdnfP21237 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.2■□□□□ 0.66
BdnfP21237 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BdnfP21237 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BdnfP21237 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BdnfP21237 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.2■□□□□ 0.66
BdnfP21237 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BdnfP21237 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.2■□□□□ 0.66
BdnfP21237 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
BdnfP21237 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BdnfP21237 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BdnfP21237 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
BdnfP21237 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
BdnfP21237 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BdnfP21237 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BdnfP21237 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.19■□□□□ 0.66
BdnfP21237 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.19■□□□□ 0.66
BdnfP21237 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BdnfP21237 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BdnfP21237 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BdnfP21237 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
BdnfP21237 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BdnfP21237 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BdnfP21237 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BdnfP21237 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
BdnfP21237 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BdnfP21237 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BdnfP21237 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BdnfP21237 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BdnfP21237 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
BdnfP21237 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BdnfP21237 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
BdnfP21237 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BdnfP21237 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BdnfP21237 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.17■□□□□ 0.66
BdnfP21237 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BdnfP21237 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.17■□□□□ 0.66
BdnfP21237 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BdnfP21237 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BdnfP21237 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
BdnfP21237 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BdnfP21237 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
BdnfP21237 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
BdnfP21237 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BdnfP21237 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BdnfP21237 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BdnfP21237 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BdnfP21237 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
BdnfP21237 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
BdnfP21237 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BdnfP21237 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
BdnfP21237 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.15■□□□□ 0.66
BdnfP21237 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BdnfP21237 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BdnfP21237 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
BdnfP21237 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BdnfP21237 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms