Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.83■□□□□ 0.6
TP20293 Gm9870-201ENSMUST00000063874 645 ntBASIC18.83■□□□□ 0.6
TP20293 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TP20293 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TP20293 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TP20293 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
TP20293 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TP20293 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TP20293 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TP20293 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
TP20293 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.82■□□□□ 0.6
TP20293 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TP20293 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TP20293 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TP20293 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.82■□□□□ 0.6
TP20293 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TP20293 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TP20293 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.81■□□□□ 0.6
TP20293 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TP20293 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TP20293 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.8■□□□□ 0.6
TP20293 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TP20293 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TP20293 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TP20293 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TP20293 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TP20293 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TP20293 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TP20293 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TP20293 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TP20293 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TP20293 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TP20293 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TP20293 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.79■□□□□ 0.6
TP20293 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TP20293 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TP20293 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TP20293 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TP20293 Golph3-202ENSMUST00000226517 2359 ntBASIC18.78■□□□□ 0.6
TP20293 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TP20293 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TP20293 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TP20293 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.78■□□□□ 0.6
TP20293 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TP20293 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.78■□□□□ 0.6
TP20293 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TP20293 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
TP20293 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TP20293 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TP20293 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TP20293 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TP20293 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TP20293 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TP20293 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TP20293 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TP20293 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TP20293 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TP20293 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TP20293 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.77■□□□□ 0.6
TP20293 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.77■□□□□ 0.6
TP20293 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TP20293 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TP20293 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TP20293 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TP20293 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TP20293 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TP20293 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.76■□□□□ 0.59
TP20293 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.76■□□□□ 0.59
TP20293 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
TP20293 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TP20293 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TP20293 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TP20293 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TP20293 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TP20293 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TP20293 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TP20293 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TP20293 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TP20293 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TP20293 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TP20293 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TP20293 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TP20293 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TP20293 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TP20293 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TP20293 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TP20293 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TP20293 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.74■□□□□ 0.59
TP20293 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TP20293 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TP20293 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TP20293 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TP20293 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.74■□□□□ 0.59
TP20293 Gm12922-201ENSMUST00000120626 809 ntBASIC18.74■□□□□ 0.59
TP20293 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.74■□□□□ 0.59
TP20293 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.74■□□□□ 0.59
TP20293 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
TP20293 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TP20293 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TP20293 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms