Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Igh-VJ558P01758 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Igh-VJ558P01758 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igh-VJ558P01758 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Igh-VJ558P01758 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igh-VJ558P01758 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Igh-VJ558P01758 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igh-VJ558P01758 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igh-VJ558P01758 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igh-VJ558P01758 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Igh-VJ558P01758 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Igh-VJ558P01758 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.48■□□□□ 0.39
Igh-VJ558P01758 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.48■□□□□ 0.39
Igh-VJ558P01758 Gm45102-201ENSMUST00000207427 857 ntBASIC17.48■□□□□ 0.39
Igh-VJ558P01758 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.48■□□□□ 0.39
Igh-VJ558P01758 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Igh-VJ558P01758 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igh-VJ558P01758 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igh-VJ558P01758 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igh-VJ558P01758 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igh-VJ558P01758 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igh-VJ558P01758 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Igh-VJ558P01758 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igh-VJ558P01758 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igh-VJ558P01758 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igh-VJ558P01758 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igh-VJ558P01758 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Igh-VJ558P01758 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igh-VJ558P01758 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igh-VJ558P01758 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Igh-VJ558P01758 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Igh-VJ558P01758 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igh-VJ558P01758 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igh-VJ558P01758 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igh-VJ558P01758 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igh-VJ558P01758 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Igh-VJ558P01758 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igh-VJ558P01758 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igh-VJ558P01758 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igh-VJ558P01758 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igh-VJ558P01758 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Igh-VJ558P01758 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.46■□□□□ 0.39
Igh-VJ558P01758 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Igh-VJ558P01758 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
Igh-VJ558P01758 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igh-VJ558P01758 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igh-VJ558P01758 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igh-VJ558P01758 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igh-VJ558P01758 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igh-VJ558P01758 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.46■□□□□ 0.39
Igh-VJ558P01758 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.45■□□□□ 0.38
Igh-VJ558P01758 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Igh-VJ558P01758 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igh-VJ558P01758 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Igh-VJ558P01758 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.45■□□□□ 0.38
Igh-VJ558P01758 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.45■□□□□ 0.38
Igh-VJ558P01758 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igh-VJ558P01758 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Igh-VJ558P01758 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igh-VJ558P01758 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igh-VJ558P01758 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Igh-VJ558P01758 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igh-VJ558P01758 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igh-VJ558P01758 Gm14117-201ENSMUST00000122417 843 ntBASIC17.44■□□□□ 0.38
Igh-VJ558P01758 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igh-VJ558P01758 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.44■□□□□ 0.38
Igh-VJ558P01758 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Igh-VJ558P01758 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igh-VJ558P01758 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igh-VJ558P01758 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igh-VJ558P01758 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Igh-VJ558P01758 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Igh-VJ558P01758 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igh-VJ558P01758 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Igh-VJ558P01758 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igh-VJ558P01758 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igh-VJ558P01758 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Igh-VJ558P01758 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igh-VJ558P01758 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igh-VJ558P01758 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Igh-VJ558P01758 Mir6236-201ENSMUST00000184437 123 ntBASIC17.42■□□□□ 0.38
Igh-VJ558P01758 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.42■□□□□ 0.38
Igh-VJ558P01758 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.42■□□□□ 0.38
Igh-VJ558P01758 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Igh-VJ558P01758 Rps24-207ENSMUST00000224568 714 ntBASIC17.42■□□□□ 0.38
Igh-VJ558P01758 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Igh-VJ558P01758 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Igh-VJ558P01758 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Igh-VJ558P01758 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Igh-VJ558P01758 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.41■□□□□ 0.38
Igh-VJ558P01758 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igh-VJ558P01758 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igh-VJ558P01758 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Igh-VJ558P01758 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igh-VJ558P01758 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igh-VJ558P01758 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igh-VJ558P01758 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igh-VJ558P01758 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Igh-VJ558P01758 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igh-VJ558P01758 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms