Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abcd4O89016 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abcd4O89016 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Abcd4O89016 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abcd4O89016 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.12■□□□□ 0.49
Abcd4O89016 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abcd4O89016 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abcd4O89016 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Abcd4O89016 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abcd4O89016 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abcd4O89016 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abcd4O89016 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abcd4O89016 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.11■□□□□ 0.49
Abcd4O89016 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.11■□□□□ 0.49
Abcd4O89016 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Abcd4O89016 Gm43137-201ENSMUST00000198052 594 ntBASIC18.11■□□□□ 0.49
Abcd4O89016 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Abcd4O89016 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Abcd4O89016 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Abcd4O89016 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Abcd4O89016 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Abcd4O89016 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Abcd4O89016 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Abcd4O89016 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Abcd4O89016 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Abcd4O89016 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.1■□□□□ 0.49
Abcd4O89016 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Abcd4O89016 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Abcd4O89016 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Abcd4O89016 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Abcd4O89016 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Abcd4O89016 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Abcd4O89016 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Abcd4O89016 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Abcd4O89016 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.09■□□□□ 0.49
Abcd4O89016 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Abcd4O89016 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Abcd4O89016 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.09■□□□□ 0.49
Abcd4O89016 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Abcd4O89016 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Abcd4O89016 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Abcd4O89016 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
Abcd4O89016 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Abcd4O89016 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Abcd4O89016 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Abcd4O89016 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Abcd4O89016 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Abcd4O89016 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Abcd4O89016 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Abcd4O89016 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Abcd4O89016 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Abcd4O89016 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Abcd4O89016 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Abcd4O89016 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Abcd4O89016 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Abcd4O89016 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Abcd4O89016 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Abcd4O89016 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Abcd4O89016 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.06■□□□□ 0.48
Abcd4O89016 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Abcd4O89016 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abcd4O89016 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Abcd4O89016 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abcd4O89016 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Abcd4O89016 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Abcd4O89016 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abcd4O89016 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abcd4O89016 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abcd4O89016 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abcd4O89016 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.05■□□□□ 0.48
Abcd4O89016 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.05■□□□□ 0.48
Abcd4O89016 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.05■□□□□ 0.48
Abcd4O89016 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.05■□□□□ 0.48
Abcd4O89016 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abcd4O89016 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abcd4O89016 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abcd4O89016 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.05■□□□□ 0.48
Abcd4O89016 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.05■□□□□ 0.48
Abcd4O89016 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abcd4O89016 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Abcd4O89016 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abcd4O89016 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.04■□□□□ 0.48
Abcd4O89016 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abcd4O89016 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.04■□□□□ 0.48
Abcd4O89016 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abcd4O89016 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abcd4O89016 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abcd4O89016 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abcd4O89016 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Abcd4O89016 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Abcd4O89016 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.03■□□□□ 0.48
Abcd4O89016 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.03■□□□□ 0.48
Abcd4O89016 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Abcd4O89016 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Abcd4O89016 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Abcd4O89016 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Abcd4O89016 Mir7075-201ENSMUST00000184187 82 ntBASIC18.03■□□□□ 0.48
Abcd4O89016 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Abcd4O89016 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.03■□□□□ 0.48
Abcd4O89016 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms