Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Syn1O88935 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Syn1O88935 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Syn1O88935 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Syn1O88935 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Syn1O88935 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Syn1O88935 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.84■□□□□ 0.93
Syn1O88935 Mir5133-201ENSMUST00000174955 77 ntBASIC20.84■□□□□ 0.93
Syn1O88935 Gm7977-201ENSMUST00000193787 748 ntBASIC20.84■□□□□ 0.93
Syn1O88935 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Syn1O88935 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.84■□□□□ 0.93
Syn1O88935 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Syn1O88935 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.83■□□□□ 0.93
Syn1O88935 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Syn1O88935 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.83■□□□□ 0.93
Syn1O88935 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Syn1O88935 Gm13234-201ENSMUST00000120010 747 ntBASIC20.83■□□□□ 0.93
Syn1O88935 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Syn1O88935 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.83■□□□□ 0.93
Syn1O88935 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Syn1O88935 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Syn1O88935 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Syn1O88935 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Syn1O88935 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Syn1O88935 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Syn1O88935 Gm27801-201ENSMUST00000184174 223 ntBASIC20.82■□□□□ 0.92
Syn1O88935 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.82■□□□□ 0.92
Syn1O88935 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Syn1O88935 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Syn1O88935 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
Syn1O88935 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Syn1O88935 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Syn1O88935 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Syn1O88935 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Syn1O88935 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Syn1O88935 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Syn1O88935 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Syn1O88935 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.81■□□□□ 0.92
Syn1O88935 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Syn1O88935 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.81■□□□□ 0.92
Syn1O88935 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Syn1O88935 Gm4968-201ENSMUST00000071458 858 ntBASIC20.81■□□□□ 0.92
Syn1O88935 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Syn1O88935 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Syn1O88935 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Syn1O88935 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Syn1O88935 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Syn1O88935 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Syn1O88935 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Syn1O88935 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Syn1O88935 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Syn1O88935 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Syn1O88935 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Syn1O88935 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.79■□□□□ 0.92
Syn1O88935 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.79■□□□□ 0.92
Syn1O88935 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.79■□□□□ 0.92
Syn1O88935 Gm7514-201ENSMUST00000209475 934 ntBASIC20.79■□□□□ 0.92
Syn1O88935 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.79■□□□□ 0.92
Syn1O88935 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Syn1O88935 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Syn1O88935 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.79■□□□□ 0.92
Syn1O88935 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.78■□□□□ 0.92
Syn1O88935 Reep4-203ENSMUST00000226563 1444 ntBASIC20.78■□□□□ 0.92
Syn1O88935 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Syn1O88935 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Syn1O88935 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
Syn1O88935 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Syn1O88935 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Syn1O88935 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Syn1O88935 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Syn1O88935 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Syn1O88935 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Syn1O88935 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.78■□□□□ 0.92
Syn1O88935 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Syn1O88935 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Syn1O88935 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Syn1O88935 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Syn1O88935 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Syn1O88935 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Syn1O88935 Gm12527-201ENSMUST00000117967 564 ntBASIC20.77■□□□□ 0.92
Syn1O88935 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.77■□□□□ 0.92
Syn1O88935 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Syn1O88935 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Syn1O88935 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Syn1O88935 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Syn1O88935 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Syn1O88935 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Syn1O88935 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Syn1O88935 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Syn1O88935 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Syn1O88935 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Syn1O88935 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Syn1O88935 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Syn1O88935 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Syn1O88935 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Syn1O88935 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Syn1O88935 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Syn1O88935 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Syn1O88935 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Syn1O88935 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms