Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cops4O88544 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Cops4O88544 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cops4O88544 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cops4O88544 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.51■□□□□ 0.55
Cops4O88544 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cops4O88544 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.5■□□□□ 0.55
Cops4O88544 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cops4O88544 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.5■□□□□ 0.55
Cops4O88544 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cops4O88544 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cops4O88544 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.5■□□□□ 0.55
Cops4O88544 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cops4O88544 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.5■□□□□ 0.55
Cops4O88544 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cops4O88544 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.5■□□□□ 0.55
Cops4O88544 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cops4O88544 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Cops4O88544 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cops4O88544 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cops4O88544 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cops4O88544 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cops4O88544 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cops4O88544 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cops4O88544 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cops4O88544 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cops4O88544 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cops4O88544 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.49■□□□□ 0.55
Cops4O88544 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cops4O88544 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.49■□□□□ 0.55
Cops4O88544 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cops4O88544 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cops4O88544 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cops4O88544 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cops4O88544 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cops4O88544 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cops4O88544 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cops4O88544 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cops4O88544 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Cops4O88544 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cops4O88544 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cops4O88544 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cops4O88544 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cops4O88544 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cops4O88544 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cops4O88544 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cops4O88544 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Cops4O88544 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.47■□□□□ 0.55
Cops4O88544 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cops4O88544 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cops4O88544 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Cops4O88544 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Cops4O88544 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.47■□□□□ 0.55
Cops4O88544 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cops4O88544 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.46■□□□□ 0.55
Cops4O88544 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cops4O88544 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Cops4O88544 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.46■□□□□ 0.55
Cops4O88544 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cops4O88544 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cops4O88544 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cops4O88544 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cops4O88544 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cops4O88544 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cops4O88544 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cops4O88544 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
Cops4O88544 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cops4O88544 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cops4O88544 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cops4O88544 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cops4O88544 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.45■□□□□ 0.54
Cops4O88544 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cops4O88544 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cops4O88544 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.45■□□□□ 0.54
Cops4O88544 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cops4O88544 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cops4O88544 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cops4O88544 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cops4O88544 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cops4O88544 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cops4O88544 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cops4O88544 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cops4O88544 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.43■□□□□ 0.54
Cops4O88544 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cops4O88544 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cops4O88544 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.43■□□□□ 0.54
Cops4O88544 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cops4O88544 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cops4O88544 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cops4O88544 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cops4O88544 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cops4O88544 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cops4O88544 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Cops4O88544 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.42■□□□□ 0.54
Cops4O88544 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cops4O88544 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cops4O88544 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cops4O88544 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cops4O88544 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cops4O88544 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms