Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfrsf17O88472 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfrsf17O88472 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfrsf17O88472 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
Tnfrsf17O88472 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfrsf17O88472 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfrsf17O88472 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tnfrsf17O88472 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tnfrsf17O88472 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tnfrsf17O88472 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfrsf17O88472 Mir6982-201ENSMUST00000184354 68 ntBASIC18.83■□□□□ 0.6
Tnfrsf17O88472 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfrsf17O88472 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfrsf17O88472 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfrsf17O88472 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfrsf17O88472 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.83■□□□□ 0.6
Tnfrsf17O88472 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.82■□□□□ 0.6
Tnfrsf17O88472 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Tnfrsf17O88472 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf17O88472 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Tnfrsf17O88472 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf17O88472 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Tnfrsf17O88472 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.82■□□□□ 0.6
Tnfrsf17O88472 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf17O88472 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf17O88472 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf17O88472 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Tnfrsf17O88472 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf17O88472 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf17O88472 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf17O88472 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tnfrsf17O88472 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf17O88472 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.81■□□□□ 0.6
Tnfrsf17O88472 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.81■□□□□ 0.6
Tnfrsf17O88472 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Tnfrsf17O88472 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.81■□□□□ 0.6
Tnfrsf17O88472 Gm10812-201ENSMUST00000099864 546 ntBASIC18.81■□□□□ 0.6
Tnfrsf17O88472 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf17O88472 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf17O88472 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf17O88472 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf17O88472 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf17O88472 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf17O88472 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf17O88472 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf17O88472 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf17O88472 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf17O88472 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf17O88472 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf17O88472 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf17O88472 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf17O88472 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf17O88472 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.79■□□□□ 0.6
Tnfrsf17O88472 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf17O88472 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf17O88472 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf17O88472 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf17O88472 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf17O88472 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf17O88472 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf17O88472 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf17O88472 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf17O88472 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Tnfrsf17O88472 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tnfrsf17O88472 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf17O88472 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf17O88472 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf17O88472 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.78■□□□□ 0.6
Tnfrsf17O88472 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.78■□□□□ 0.6
Tnfrsf17O88472 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.78■□□□□ 0.6
Tnfrsf17O88472 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Tnfrsf17O88472 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tnfrsf17O88472 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf17O88472 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tnfrsf17O88472 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Tnfrsf17O88472 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf17O88472 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf17O88472 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf17O88472 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Tnfrsf17O88472 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.77■□□□□ 0.6
Tnfrsf17O88472 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.77■□□□□ 0.6
Tnfrsf17O88472 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf17O88472 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Tnfrsf17O88472 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tnfrsf17O88472 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tnfrsf17O88472 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tnfrsf17O88472 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Tnfrsf17O88472 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf17O88472 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.76■□□□□ 0.59
Tnfrsf17O88472 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf17O88472 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Tnfrsf17O88472 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.76■□□□□ 0.59
Tnfrsf17O88472 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf17O88472 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Tnfrsf17O88472 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Tnfrsf17O88472 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf17O88472 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf17O88472 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.75■□□□□ 0.59
Tnfrsf17O88472 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf17O88472 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms