Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Cacna1hO88427 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1hO88427 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1hO88427 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1hO88427 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1hO88427 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.94■□□□□ 0.78
Cacna1hO88427 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1hO88427 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1hO88427 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.94■□□□□ 0.78
Cacna1hO88427 Gm6211-202ENSMUST00000167849 925 ntBASIC19.94■□□□□ 0.78
Cacna1hO88427 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1hO88427 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1hO88427 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1hO88427 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Cacna1hO88427 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.93■□□□□ 0.78
Cacna1hO88427 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1hO88427 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1hO88427 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1hO88427 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Cacna1hO88427 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1hO88427 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.92■□□□□ 0.78
Cacna1hO88427 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1hO88427 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1hO88427 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1hO88427 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cacna1hO88427 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cacna1hO88427 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.91■□□□□ 0.78
Cacna1hO88427 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cacna1hO88427 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.91■□□□□ 0.78
Cacna1hO88427 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cacna1hO88427 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cacna1hO88427 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cacna1hO88427 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cacna1hO88427 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cacna1hO88427 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cacna1hO88427 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cacna1hO88427 Gm11643-201ENSMUST00000119578 864 ntBASIC19.9■□□□□ 0.78
Cacna1hO88427 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cacna1hO88427 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cacna1hO88427 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Cacna1hO88427 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cacna1hO88427 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cacna1hO88427 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.89■□□□□ 0.77
Cacna1hO88427 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cacna1hO88427 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Cacna1hO88427 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cacna1hO88427 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.88■□□□□ 0.77
Cacna1hO88427 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.88■□□□□ 0.77
Cacna1hO88427 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cacna1hO88427 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacna1hO88427 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cacna1hO88427 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cacna1hO88427 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacna1hO88427 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacna1hO88427 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cacna1hO88427 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.88■□□□□ 0.77
Cacna1hO88427 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacna1hO88427 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.88■□□□□ 0.77
Cacna1hO88427 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cacna1hO88427 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacna1hO88427 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
Cacna1hO88427 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacna1hO88427 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cacna1hO88427 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Cacna1hO88427 Gm10819-201ENSMUST00000099988 561 ntBASIC19.87■□□□□ 0.77
Cacna1hO88427 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.87■□□□□ 0.77
Cacna1hO88427 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacna1hO88427 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacna1hO88427 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.86■□□□□ 0.77
Cacna1hO88427 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacna1hO88427 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacna1hO88427 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacna1hO88427 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacna1hO88427 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Cacna1hO88427 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cacna1hO88427 Gm15565-201ENSMUST00000118890 427 ntBASIC19.86■□□□□ 0.77
Cacna1hO88427 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cacna1hO88427 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.86■□□□□ 0.77
Cacna1hO88427 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacna1hO88427 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cacna1hO88427 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cacna1hO88427 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacna1hO88427 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacna1hO88427 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cacna1hO88427 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cacna1hO88427 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacna1hO88427 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Cacna1hO88427 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacna1hO88427 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacna1hO88427 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cacna1hO88427 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Cacna1hO88427 Gm6576-201ENSMUST00000169678 883 ntBASIC19.84■□□□□ 0.77
Cacna1hO88427 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.84■□□□□ 0.77
Cacna1hO88427 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1hO88427 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1hO88427 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1hO88427 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.84■□□□□ 0.77
Cacna1hO88427 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1hO88427 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cacna1hO88427 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms