Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Gm7143-201ENSMUST00000222811 859 ntBASIC17.9■□□□□ 0.46
SgceO70258 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SgceO70258 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SgceO70258 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SgceO70258 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SgceO70258 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SgceO70258 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SgceO70258 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SgceO70258 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SgceO70258 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SgceO70258 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SgceO70258 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SgceO70258 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.89■□□□□ 0.45
SgceO70258 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.89■□□□□ 0.45
SgceO70258 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SgceO70258 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SgceO70258 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SgceO70258 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SgceO70258 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SgceO70258 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SgceO70258 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
SgceO70258 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SgceO70258 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SgceO70258 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SgceO70258 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.88■□□□□ 0.45
SgceO70258 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SgceO70258 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SgceO70258 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SgceO70258 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SgceO70258 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SgceO70258 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SgceO70258 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SgceO70258 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SgceO70258 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SgceO70258 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SgceO70258 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SgceO70258 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SgceO70258 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SgceO70258 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SgceO70258 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
SgceO70258 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SgceO70258 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SgceO70258 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SgceO70258 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SgceO70258 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SgceO70258 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SgceO70258 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SgceO70258 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.86■□□□□ 0.45
SgceO70258 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SgceO70258 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SgceO70258 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
SgceO70258 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SgceO70258 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SgceO70258 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SgceO70258 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SgceO70258 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SgceO70258 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SgceO70258 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.85■□□□□ 0.45
SgceO70258 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SgceO70258 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SgceO70258 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.85■□□□□ 0.45
SgceO70258 Rps24-207ENSMUST00000224568 714 ntBASIC17.85■□□□□ 0.45
SgceO70258 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SgceO70258 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SgceO70258 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SgceO70258 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SgceO70258 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SgceO70258 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.84■□□□□ 0.45
SgceO70258 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SgceO70258 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.84■□□□□ 0.45
SgceO70258 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.84■□□□□ 0.45
SgceO70258 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SgceO70258 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SgceO70258 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SgceO70258 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SgceO70258 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.84■□□□□ 0.45
SgceO70258 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SgceO70258 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SgceO70258 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SgceO70258 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SgceO70258 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SgceO70258 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.83■□□□□ 0.44
SgceO70258 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SgceO70258 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgceO70258 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgceO70258 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgceO70258 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SgceO70258 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.82■□□□□ 0.44
SgceO70258 Gm45102-201ENSMUST00000207427 857 ntBASIC17.82■□□□□ 0.44
SgceO70258 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgceO70258 Gm9870-201ENSMUST00000063874 645 ntBASIC17.82■□□□□ 0.44
SgceO70258 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgceO70258 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SgceO70258 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgceO70258 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgceO70258 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgceO70258 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgceO70258 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SgceO70258 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SgceO70258 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms