Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ldb2O55203 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ldb2O55203 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ldb2O55203 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.06■□□□□ 0.8
Ldb2O55203 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ldb2O55203 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ldb2O55203 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ldb2O55203 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ldb2O55203 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ldb2O55203 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.05■□□□□ 0.8
Ldb2O55203 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ldb2O55203 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ldb2O55203 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ldb2O55203 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ldb2O55203 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ldb2O55203 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ldb2O55203 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ldb2O55203 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ldb2O55203 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.04■□□□□ 0.8
Ldb2O55203 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ldb2O55203 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Ldb2O55203 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ldb2O55203 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ldb2O55203 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ldb2O55203 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ldb2O55203 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ldb2O55203 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ldb2O55203 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ldb2O55203 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ldb2O55203 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Ldb2O55203 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ldb2O55203 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.03■□□□□ 0.8
Ldb2O55203 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ldb2O55203 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ldb2O55203 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ldb2O55203 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ldb2O55203 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ldb2O55203 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ldb2O55203 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ldb2O55203 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ldb2O55203 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Ldb2O55203 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ldb2O55203 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ldb2O55203 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ldb2O55203 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.02■□□□□ 0.8
Ldb2O55203 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.02■□□□□ 0.8
Ldb2O55203 Gm12922-201ENSMUST00000120626 809 ntBASIC20.02■□□□□ 0.8
Ldb2O55203 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ldb2O55203 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ldb2O55203 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.01■□□□□ 0.79
Ldb2O55203 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ldb2O55203 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ldb2O55203 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ldb2O55203 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ldb2O55203 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Ldb2O55203 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ldb2O55203 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
Ldb2O55203 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ldb2O55203 Golgb1-201ENSMUST00000023534 498 ntBASIC20■□□□□ 0.79
Ldb2O55203 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Ldb2O55203 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Ldb2O55203 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Ldb2O55203 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ldb2O55203 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20■□□□□ 0.79
Ldb2O55203 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ldb2O55203 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ldb2O55203 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
Ldb2O55203 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ldb2O55203 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.99■□□□□ 0.79
Ldb2O55203 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Ldb2O55203 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.99■□□□□ 0.79
Ldb2O55203 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ldb2O55203 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Ldb2O55203 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ldb2O55203 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.98■□□□□ 0.79
Ldb2O55203 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.98■□□□□ 0.79
Ldb2O55203 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ldb2O55203 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ldb2O55203 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.98■□□□□ 0.79
Ldb2O55203 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.98■□□□□ 0.79
Ldb2O55203 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.98■□□□□ 0.79
Ldb2O55203 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Ldb2O55203 Mir6236-201ENSMUST00000184437 123 ntBASIC19.97■□□□□ 0.79
Ldb2O55203 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ldb2O55203 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ldb2O55203 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ldb2O55203 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ldb2O55203 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ldb2O55203 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ldb2O55203 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ldb2O55203 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ldb2O55203 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Ldb2O55203 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ldb2O55203 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ldb2O55203 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.96■□□□□ 0.79
Ldb2O55203 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ldb2O55203 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ldb2O55203 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ldb2O55203 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ldb2O55203 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 151.4 ms