Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ClockO08785 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
ClockO08785 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ClockO08785 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ClockO08785 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ClockO08785 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ClockO08785 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.03■□□□□ 0.64
ClockO08785 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
ClockO08785 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ClockO08785 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.03■□□□□ 0.64
ClockO08785 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
ClockO08785 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ClockO08785 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
ClockO08785 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.03■□□□□ 0.64
ClockO08785 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ClockO08785 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.03■□□□□ 0.64
ClockO08785 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ClockO08785 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
ClockO08785 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.02■□□□□ 0.64
ClockO08785 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
ClockO08785 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ClockO08785 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ClockO08785 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ClockO08785 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
ClockO08785 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ClockO08785 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
ClockO08785 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
ClockO08785 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
ClockO08785 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ClockO08785 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ClockO08785 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ClockO08785 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
ClockO08785 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.01■□□□□ 0.63
ClockO08785 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ClockO08785 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ClockO08785 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ClockO08785 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ClockO08785 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ClockO08785 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19■□□□□ 0.63
ClockO08785 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ClockO08785 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19■□□□□ 0.63
ClockO08785 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19■□□□□ 0.63
ClockO08785 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.99■□□□□ 0.63
ClockO08785 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.99■□□□□ 0.63
ClockO08785 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ClockO08785 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ClockO08785 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ClockO08785 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
ClockO08785 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
ClockO08785 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.99■□□□□ 0.63
ClockO08785 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ClockO08785 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ClockO08785 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ClockO08785 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ClockO08785 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.98■□□□□ 0.63
ClockO08785 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ClockO08785 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ClockO08785 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ClockO08785 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
ClockO08785 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ClockO08785 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ClockO08785 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ClockO08785 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ClockO08785 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.97■□□□□ 0.63
ClockO08785 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ClockO08785 Gm11175-201ENSMUST00000116172 543 ntBASIC18.97■□□□□ 0.63
ClockO08785 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ClockO08785 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.97■□□□□ 0.63
ClockO08785 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ClockO08785 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ClockO08785 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClockO08785 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.96■□□□□ 0.63
ClockO08785 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ClockO08785 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClockO08785 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClockO08785 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.96■□□□□ 0.63
ClockO08785 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClockO08785 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClockO08785 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClockO08785 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClockO08785 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ClockO08785 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ClockO08785 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ClockO08785 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ClockO08785 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ClockO08785 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ClockO08785 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
ClockO08785 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ClockO08785 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ClockO08785 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ClockO08785 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ClockO08785 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ClockO08785 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ClockO08785 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ClockO08785 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ClockO08785 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ClockO08785 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ClockO08785 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ClockO08785 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ClockO08785 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms