Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Raet1bO08603 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Raet1bO08603 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Raet1bO08603 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.83■□□□□ 0.45
Raet1bO08603 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.83■□□□□ 0.45
Raet1bO08603 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.83■□□□□ 0.44
Raet1bO08603 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.83■□□□□ 0.44
Raet1bO08603 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Raet1bO08603 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Raet1bO08603 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Raet1bO08603 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Raet1bO08603 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Raet1bO08603 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Raet1bO08603 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Raet1bO08603 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Raet1bO08603 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Raet1bO08603 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Raet1bO08603 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Raet1bO08603 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Raet1bO08603 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Raet1bO08603 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Raet1bO08603 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Raet1bO08603 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Raet1bO08603 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Raet1bO08603 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.82■□□□□ 0.44
Raet1bO08603 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Raet1bO08603 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Raet1bO08603 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Raet1bO08603 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Raet1bO08603 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Raet1bO08603 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.81■□□□□ 0.44
Raet1bO08603 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.81■□□□□ 0.44
Raet1bO08603 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.81■□□□□ 0.44
Raet1bO08603 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Raet1bO08603 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Raet1bO08603 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Raet1bO08603 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.81■□□□□ 0.44
Raet1bO08603 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Raet1bO08603 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Raet1bO08603 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Raet1bO08603 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Raet1bO08603 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Raet1bO08603 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Raet1bO08603 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Raet1bO08603 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Raet1bO08603 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
Raet1bO08603 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Raet1bO08603 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Raet1bO08603 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.8■□□□□ 0.44
Raet1bO08603 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Raet1bO08603 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.8■□□□□ 0.44
Raet1bO08603 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Raet1bO08603 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Raet1bO08603 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Raet1bO08603 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Raet1bO08603 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.79■□□□□ 0.44
Raet1bO08603 Gm43530-201ENSMUST00000195920 274 ntBASIC17.79■□□□□ 0.44
Raet1bO08603 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Raet1bO08603 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Raet1bO08603 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Raet1bO08603 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Raet1bO08603 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Raet1bO08603 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Raet1bO08603 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Raet1bO08603 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Raet1bO08603 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Raet1bO08603 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Raet1bO08603 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.78■□□□□ 0.44
Raet1bO08603 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Raet1bO08603 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Raet1bO08603 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Raet1bO08603 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.78■□□□□ 0.44
Raet1bO08603 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Raet1bO08603 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Raet1bO08603 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Raet1bO08603 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Raet1bO08603 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Raet1bO08603 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Raet1bO08603 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Raet1bO08603 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Raet1bO08603 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Raet1bO08603 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Raet1bO08603 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Raet1bO08603 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Raet1bO08603 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Raet1bO08603 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Raet1bO08603 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Raet1bO08603 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.76■□□□□ 0.43
Raet1bO08603 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Raet1bO08603 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Raet1bO08603 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Raet1bO08603 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Raet1bO08603 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Raet1bO08603 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Raet1bO08603 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Raet1bO08603 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Raet1bO08603 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Raet1bO08603 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Raet1bO08603 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Raet1bO08603 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms