Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav13d-3J3QMG8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav13d-3J3QMG8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trav13d-3J3QMG8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav13d-3J3QMG8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav13d-3J3QMG8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav13d-3J3QMG8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Trav13d-3J3QMG8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav13d-3J3QMG8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav13d-3J3QMG8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.72■□□□□ 0.43
Trav13d-3J3QMG8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav13d-3J3QMG8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.72■□□□□ 0.43
Trav13d-3J3QMG8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav13d-3J3QMG8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Trav13d-3J3QMG8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav13d-3J3QMG8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav13d-3J3QMG8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.71■□□□□ 0.43
Trav13d-3J3QMG8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav13d-3J3QMG8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav13d-3J3QMG8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav13d-3J3QMG8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav13d-3J3QMG8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav13d-3J3QMG8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav13d-3J3QMG8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav13d-3J3QMG8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav13d-3J3QMG8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav13d-3J3QMG8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.71■□□□□ 0.43
Trav13d-3J3QMG8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav13d-3J3QMG8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav13d-3J3QMG8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav13d-3J3QMG8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav13d-3J3QMG8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trav13d-3J3QMG8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav13d-3J3QMG8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trav13d-3J3QMG8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trav13d-3J3QMG8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav13d-3J3QMG8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trav13d-3J3QMG8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav13d-3J3QMG8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trav13d-3J3QMG8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav13d-3J3QMG8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trav13d-3J3QMG8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trav13d-3J3QMG8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav13d-3J3QMG8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav13d-3J3QMG8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav13d-3J3QMG8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.69■□□□□ 0.42
Trav13d-3J3QMG8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.69■□□□□ 0.42
Trav13d-3J3QMG8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav13d-3J3QMG8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Trav13d-3J3QMG8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav13d-3J3QMG8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav13d-3J3QMG8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav13d-3J3QMG8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav13d-3J3QMG8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Trav13d-3J3QMG8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav13d-3J3QMG8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.68■□□□□ 0.42
Trav13d-3J3QMG8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav13d-3J3QMG8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav13d-3J3QMG8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.68■□□□□ 0.42
Trav13d-3J3QMG8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trav13d-3J3QMG8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav13d-3J3QMG8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav13d-3J3QMG8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav13d-3J3QMG8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav13d-3J3QMG8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.67■□□□□ 0.42
Trav13d-3J3QMG8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav13d-3J3QMG8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trav13d-3J3QMG8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav13d-3J3QMG8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav13d-3J3QMG8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.67■□□□□ 0.42
Trav13d-3J3QMG8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav13d-3J3QMG8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav13d-3J3QMG8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav13d-3J3QMG8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav13d-3J3QMG8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Trav13d-3J3QMG8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trav13d-3J3QMG8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav13d-3J3QMG8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.66■□□□□ 0.42
Trav13d-3J3QMG8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav13d-3J3QMG8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav13d-3J3QMG8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav13d-3J3QMG8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav13d-3J3QMG8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav13d-3J3QMG8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav13d-3J3QMG8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
Trav13d-3J3QMG8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav13d-3J3QMG8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav13d-3J3QMG8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.66■□□□□ 0.42
Trav13d-3J3QMG8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav13d-3J3QMG8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav13d-3J3QMG8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13d-3J3QMG8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13d-3J3QMG8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13d-3J3QMG8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13d-3J3QMG8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.65■□□□□ 0.42
Trav13d-3J3QMG8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13d-3J3QMG8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trav13d-3J3QMG8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13d-3J3QMG8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13d-3J3QMG8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms