Protein–RNA interactions for Protein: E1U8D0

Soga1, Protein SOGA1, mousemouse

Predictions only

Length 1,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Soga1E1U8D0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
Soga1E1U8D0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC31.78■■■□□ 2.68
Soga1E1U8D0 Ap3s1-204ENSMUST00000225520 957 ntBASIC31.77■■■□□ 2.68
Soga1E1U8D0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Soga1E1U8D0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
Soga1E1U8D0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Soga1E1U8D0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.68
Soga1E1U8D0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC31.76■■■□□ 2.68
Soga1E1U8D0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Soga1E1U8D0 Reep4-203ENSMUST00000226563 1444 ntBASIC31.76■■■□□ 2.67
Soga1E1U8D0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Soga1E1U8D0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Soga1E1U8D0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Soga1E1U8D0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
Soga1E1U8D0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Soga1E1U8D0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Soga1E1U8D0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
Soga1E1U8D0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC31.75■■■□□ 2.67
Soga1E1U8D0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Soga1E1U8D0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Soga1E1U8D0 Mir5133-201ENSMUST00000174955 77 ntBASIC31.74■■■□□ 2.67
Soga1E1U8D0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Soga1E1U8D0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Soga1E1U8D0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Soga1E1U8D0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
Soga1E1U8D0 Gm12527-201ENSMUST00000117967 564 ntBASIC31.73■■■□□ 2.67
Soga1E1U8D0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC31.73■■■□□ 2.67
Soga1E1U8D0 Mir7071-201ENSMUST00000184847 69 ntBASIC31.73■■■□□ 2.67
Soga1E1U8D0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC31.73■■■□□ 2.67
Soga1E1U8D0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC31.73■■■□□ 2.67
Soga1E1U8D0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC31.73■■■□□ 2.67
Soga1E1U8D0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Soga1E1U8D0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
Soga1E1U8D0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Soga1E1U8D0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
Soga1E1U8D0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Soga1E1U8D0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Soga1E1U8D0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Soga1E1U8D0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Soga1E1U8D0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Soga1E1U8D0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC31.71■■■□□ 2.67
Soga1E1U8D0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Soga1E1U8D0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
Soga1E1U8D0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
Soga1E1U8D0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC31.7■■■□□ 2.67
Soga1E1U8D0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Soga1E1U8D0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Soga1E1U8D0 Gm42555-201ENSMUST00000199304 1039 ntBASIC31.69■■■□□ 2.66
Soga1E1U8D0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Soga1E1U8D0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Soga1E1U8D0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Soga1E1U8D0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
Soga1E1U8D0 Gm8520-201ENSMUST00000186517 868 ntBASIC31.68■■■□□ 2.66
Soga1E1U8D0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Soga1E1U8D0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Soga1E1U8D0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC31.67■■■□□ 2.66
Soga1E1U8D0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
Soga1E1U8D0 Gm7514-201ENSMUST00000209475 934 ntBASIC31.67■■■□□ 2.66
Soga1E1U8D0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Soga1E1U8D0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
Soga1E1U8D0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Soga1E1U8D0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Soga1E1U8D0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC31.66■■■□□ 2.66
Soga1E1U8D0 Il17rd-202ENSMUST00000223942 2186 ntBASIC31.65■■■□□ 2.66
Soga1E1U8D0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Soga1E1U8D0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Soga1E1U8D0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
Soga1E1U8D0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC31.65■■■□□ 2.66
Soga1E1U8D0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC31.65■■■□□ 2.66
Soga1E1U8D0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Soga1E1U8D0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.66
Soga1E1U8D0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Soga1E1U8D0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Soga1E1U8D0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Soga1E1U8D0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Soga1E1U8D0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC31.63■■■□□ 2.65
Soga1E1U8D0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC31.63■■■□□ 2.65
Soga1E1U8D0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
Soga1E1U8D0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Soga1E1U8D0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC31.62■■■□□ 2.65
Soga1E1U8D0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
Soga1E1U8D0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC31.61■■■□□ 2.65
Soga1E1U8D0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
Soga1E1U8D0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC31.61■■■□□ 2.65
Soga1E1U8D0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Soga1E1U8D0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Soga1E1U8D0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Soga1E1U8D0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Soga1E1U8D0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Soga1E1U8D0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
Soga1E1U8D0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
Soga1E1U8D0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Soga1E1U8D0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Soga1E1U8D0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Soga1E1U8D0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC31.58■■■□□ 2.65
Soga1E1U8D0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Soga1E1U8D0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Soga1E1U8D0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Soga1E1U8D0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Soga1E1U8D0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC31.58■■■□□ 2.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms