Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ubr4A2AN08 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Ubr4A2AN08 AC153881.2-201ENSMUST00000214877 204 ntBASIC10.91□□□□□ -0.66
Ubr4A2AN08 Arhgef33-211ENSMUST00000225658 473 ntBASIC10.91□□□□□ -0.66
Ubr4A2AN08 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ubr4A2AN08 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ubr4A2AN08 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ubr4A2AN08 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ubr4A2AN08 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ubr4A2AN08 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ubr4A2AN08 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Ubr4A2AN08 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC10.91□□□□□ -0.66
Ubr4A2AN08 Gm20472-201ENSMUST00000174403 1240 ntBASIC10.91□□□□□ -0.66
Ubr4A2AN08 Gm5186-201ENSMUST00000218781 920 ntBASIC10.91□□□□□ -0.66
Ubr4A2AN08 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ubr4A2AN08 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Ubr4A2AN08 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ubr4A2AN08 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ubr4A2AN08 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ubr4A2AN08 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ubr4A2AN08 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Ubr4A2AN08 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ubr4A2AN08 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ubr4A2AN08 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ubr4A2AN08 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC10.9□□□□□ -0.66
Ubr4A2AN08 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC10.9□□□□□ -0.66
Ubr4A2AN08 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ubr4A2AN08 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ubr4A2AN08 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Ubr4A2AN08 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.67
Ubr4A2AN08 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC10.89□□□□□ -0.67
Ubr4A2AN08 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ubr4A2AN08 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC10.89□□□□□ -0.67
Ubr4A2AN08 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ubr4A2AN08 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ubr4A2AN08 AC166356.1-201ENSMUST00000228236 1426 ntBASIC10.89□□□□□ -0.67
Ubr4A2AN08 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ubr4A2AN08 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC10.89□□□□□ -0.67
Ubr4A2AN08 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ubr4A2AN08 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ubr4A2AN08 AC154621.1-201ENSMUST00000226155 1119 ntBASIC10.89□□□□□ -0.67
Ubr4A2AN08 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ubr4A2AN08 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ubr4A2AN08 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC10.89□□□□□ -0.67
Ubr4A2AN08 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC10.89□□□□□ -0.67
Ubr4A2AN08 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Ubr4A2AN08 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Ubr4A2AN08 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ubr4A2AN08 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ubr4A2AN08 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ubr4A2AN08 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ubr4A2AN08 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC10.88□□□□□ -0.67
Ubr4A2AN08 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Ubr4A2AN08 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ubr4A2AN08 Gm6365-201ENSMUST00000054711 744 ntBASIC10.88□□□□□ -0.67
Ubr4A2AN08 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ubr4A2AN08 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC10.88□□□□□ -0.67
Ubr4A2AN08 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC10.88□□□□□ -0.67
Ubr4A2AN08 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC10.88□□□□□ -0.67
Ubr4A2AN08 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ubr4A2AN08 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC10.87□□□□□ -0.67
Ubr4A2AN08 Gm37055-201ENSMUST00000191866 133 ntBASIC10.87□□□□□ -0.67
Ubr4A2AN08 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Ubr4A2AN08 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC10.87□□□□□ -0.67
Ubr4A2AN08 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ubr4A2AN08 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ubr4A2AN08 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ubr4A2AN08 Gm6728-201ENSMUST00000178117 1065 ntBASIC10.87□□□□□ -0.67
Ubr4A2AN08 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Ubr4A2AN08 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ubr4A2AN08 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ubr4A2AN08 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ubr4A2AN08 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ubr4A2AN08 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ubr4A2AN08 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Ubr4A2AN08 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Ubr4A2AN08 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ubr4A2AN08 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ubr4A2AN08 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ubr4A2AN08 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ubr4A2AN08 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ubr4A2AN08 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC10.87□□□□□ -0.67
Ubr4A2AN08 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ubr4A2AN08 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ubr4A2AN08 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC10.86□□□□□ -0.67
Ubr4A2AN08 Gm26524-201ENSMUST00000192339 390 ntBASIC10.86□□□□□ -0.67
Ubr4A2AN08 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ubr4A2AN08 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Ubr4A2AN08 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ubr4A2AN08 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ubr4A2AN08 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ubr4A2AN08 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC10.86□□□□□ -0.67
Ubr4A2AN08 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC10.86□□□□□ -0.67
Ubr4A2AN08 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC10.86□□□□□ -0.67
Ubr4A2AN08 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ubr4A2AN08 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC10.86□□□□□ -0.67
Ubr4A2AN08 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ubr4A2AN08 Gm44771-201ENSMUST00000206975 626 ntBASIC10.86□□□□□ -0.67
Ubr4A2AN08 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ubr4A2AN08 AC153881.1-201ENSMUST00000214448 284 ntBASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms