Protein–RNA interactions for Protein: A2ACP1

Ttc39a, Tetratricopeptide repeat protein 39A, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39aA2ACP1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ttc39aA2ACP1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc39aA2ACP1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ttc39aA2ACP1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.68■□□□□ 0.74
Ttc39aA2ACP1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc39aA2ACP1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc39aA2ACP1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ttc39aA2ACP1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc39aA2ACP1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc39aA2ACP1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc39aA2ACP1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc39aA2ACP1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc39aA2ACP1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Ttc39aA2ACP1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc39aA2ACP1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.67■□□□□ 0.74
Ttc39aA2ACP1 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.67■□□□□ 0.74
Ttc39aA2ACP1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc39aA2ACP1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc39aA2ACP1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc39aA2ACP1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc39aA2ACP1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc39aA2ACP1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.66■□□□□ 0.74
Ttc39aA2ACP1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
Ttc39aA2ACP1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.66■□□□□ 0.74
Ttc39aA2ACP1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc39aA2ACP1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ttc39aA2ACP1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc39aA2ACP1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.65■□□□□ 0.74
Ttc39aA2ACP1 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.65■□□□□ 0.74
Ttc39aA2ACP1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ttc39aA2ACP1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.65■□□□□ 0.74
Ttc39aA2ACP1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Ttc39aA2ACP1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ttc39aA2ACP1 Gm10493-201ENSMUST00000097270 612 ntBASIC19.65■□□□□ 0.74
Ttc39aA2ACP1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.65■□□□□ 0.74
Ttc39aA2ACP1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc39aA2ACP1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ttc39aA2ACP1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.64■□□□□ 0.73
Ttc39aA2ACP1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ttc39aA2ACP1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ttc39aA2ACP1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ttc39aA2ACP1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ttc39aA2ACP1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.64■□□□□ 0.73
Ttc39aA2ACP1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.64■□□□□ 0.73
Ttc39aA2ACP1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc39aA2ACP1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Ttc39aA2ACP1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc39aA2ACP1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Ttc39aA2ACP1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc39aA2ACP1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc39aA2ACP1 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.63■□□□□ 0.73
Ttc39aA2ACP1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ttc39aA2ACP1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ttc39aA2ACP1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
Ttc39aA2ACP1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.62■□□□□ 0.73
Ttc39aA2ACP1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc39aA2ACP1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.62■□□□□ 0.73
Ttc39aA2ACP1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc39aA2ACP1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc39aA2ACP1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc39aA2ACP1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
Ttc39aA2ACP1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc39aA2ACP1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc39aA2ACP1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc39aA2ACP1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Ttc39aA2ACP1 Smad6-203ENSMUST00000179458 273 ntBASIC19.61■□□□□ 0.73
Ttc39aA2ACP1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.61■□□□□ 0.73
Ttc39aA2ACP1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.61■□□□□ 0.73
Ttc39aA2ACP1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.61■□□□□ 0.73
Ttc39aA2ACP1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc39aA2ACP1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc39aA2ACP1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
Ttc39aA2ACP1 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.6■□□□□ 0.73
Ttc39aA2ACP1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Ttc39aA2ACP1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.6■□□□□ 0.73
Ttc39aA2ACP1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ttc39aA2ACP1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ttc39aA2ACP1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ttc39aA2ACP1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
Ttc39aA2ACP1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ttc39aA2ACP1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ttc39aA2ACP1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc39aA2ACP1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc39aA2ACP1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc39aA2ACP1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc39aA2ACP1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.59■□□□□ 0.73
Ttc39aA2ACP1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc39aA2ACP1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc39aA2ACP1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.59■□□□□ 0.73
Ttc39aA2ACP1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc39aA2ACP1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc39aA2ACP1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc39aA2ACP1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc39aA2ACP1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc39aA2ACP1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc39aA2ACP1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc39aA2ACP1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc39aA2ACP1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ttc39aA2ACP1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ttc39aA2ACP1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms