Protein–RNA interactions for Protein: A1L3P4

Slc9a6, Sodium/hydrogen exchanger, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a6A1L3P4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Slc9a6A1L3P4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc9a6A1L3P4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Slc9a6A1L3P4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc9a6A1L3P4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.87■□□□□ 0.61
Slc9a6A1L3P4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc9a6A1L3P4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc9a6A1L3P4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc9a6A1L3P4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc9a6A1L3P4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Slc9a6A1L3P4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Slc9a6A1L3P4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc9a6A1L3P4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc9a6A1L3P4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc9a6A1L3P4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slc9a6A1L3P4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.86■□□□□ 0.61
Slc9a6A1L3P4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc9a6A1L3P4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Slc9a6A1L3P4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc9a6A1L3P4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.85■□□□□ 0.61
Slc9a6A1L3P4 Gm7143-201ENSMUST00000222811 859 ntBASIC18.85■□□□□ 0.61
Slc9a6A1L3P4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Slc9a6A1L3P4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc9a6A1L3P4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slc9a6A1L3P4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc9a6A1L3P4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc9a6A1L3P4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc9a6A1L3P4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Slc9a6A1L3P4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc9a6A1L3P4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc9a6A1L3P4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc9a6A1L3P4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc9a6A1L3P4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc9a6A1L3P4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc9a6A1L3P4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Slc9a6A1L3P4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc9a6A1L3P4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc9a6A1L3P4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc9a6A1L3P4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc9a6A1L3P4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc9a6A1L3P4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc9a6A1L3P4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc9a6A1L3P4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc9a6A1L3P4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Slc9a6A1L3P4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc9a6A1L3P4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc9a6A1L3P4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Slc9a6A1L3P4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc9a6A1L3P4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.83■□□□□ 0.6
Slc9a6A1L3P4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Slc9a6A1L3P4 Rps24-207ENSMUST00000224568 714 ntBASIC18.83■□□□□ 0.6
Slc9a6A1L3P4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Slc9a6A1L3P4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Slc9a6A1L3P4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Slc9a6A1L3P4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc9a6A1L3P4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.82■□□□□ 0.6
Slc9a6A1L3P4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.82■□□□□ 0.6
Slc9a6A1L3P4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc9a6A1L3P4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Slc9a6A1L3P4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc9a6A1L3P4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc9a6A1L3P4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc9a6A1L3P4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc9a6A1L3P4 Gm14117-201ENSMUST00000122417 843 ntBASIC18.81■□□□□ 0.6
Slc9a6A1L3P4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.81■□□□□ 0.6
Slc9a6A1L3P4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.81■□□□□ 0.6
Slc9a6A1L3P4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc9a6A1L3P4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Slc9a6A1L3P4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc9a6A1L3P4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Slc9a6A1L3P4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Slc9a6A1L3P4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.8■□□□□ 0.6
Slc9a6A1L3P4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc9a6A1L3P4 Iqck-206ENSMUST00000208658 2891 ntBASIC18.8■□□□□ 0.6
Slc9a6A1L3P4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc9a6A1L3P4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.8■□□□□ 0.6
Slc9a6A1L3P4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc9a6A1L3P4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Slc9a6A1L3P4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc9a6A1L3P4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc9a6A1L3P4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc9a6A1L3P4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.79■□□□□ 0.6
Slc9a6A1L3P4 Gm45102-201ENSMUST00000207427 857 ntBASIC18.79■□□□□ 0.6
Slc9a6A1L3P4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc9a6A1L3P4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc9a6A1L3P4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc9a6A1L3P4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc9a6A1L3P4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc9a6A1L3P4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc9a6A1L3P4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc9a6A1L3P4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc9a6A1L3P4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc9a6A1L3P4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Slc9a6A1L3P4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc9a6A1L3P4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc9a6A1L3P4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Slc9a6A1L3P4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.78■□□□□ 0.6
Slc9a6A1L3P4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc9a6A1L3P4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc9a6A1L3P4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms