Protein–RNA interactions for Protein: A1L3C8

Gm5089, EG328479 protein, mousemouse

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5089A1L3C8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5089A1L3C8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5089A1L3C8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5089A1L3C8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5089A1L3C8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5089A1L3C8 Gm27011-201ENSMUST00000182352 972 ntBASIC16.19■□□□□ 0.18
Gm5089A1L3C8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.19■□□□□ 0.18
Gm5089A1L3C8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5089A1L3C8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5089A1L3C8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5089A1L3C8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5089A1L3C8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5089A1L3C8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5089A1L3C8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5089A1L3C8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.18■□□□□ 0.18
Gm5089A1L3C8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Gm5089A1L3C8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.18■□□□□ 0.18
Gm5089A1L3C8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.18■□□□□ 0.18
Gm5089A1L3C8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.18■□□□□ 0.18
Gm5089A1L3C8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5089A1L3C8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5089A1L3C8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5089A1L3C8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5089A1L3C8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5089A1L3C8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.17■□□□□ 0.18
Gm5089A1L3C8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5089A1L3C8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5089A1L3C8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Gm5089A1L3C8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.17■□□□□ 0.18
Gm5089A1L3C8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5089A1L3C8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Gm5089A1L3C8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5089A1L3C8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5089A1L3C8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5089A1L3C8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5089A1L3C8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5089A1L3C8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5089A1L3C8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5089A1L3C8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5089A1L3C8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5089A1L3C8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm5089A1L3C8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm5089A1L3C8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm5089A1L3C8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Gm5089A1L3C8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Gm5089A1L3C8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm5089A1L3C8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm5089A1L3C8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.16■□□□□ 0.18
Gm5089A1L3C8 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.16■□□□□ 0.18
Gm5089A1L3C8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm5089A1L3C8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Gm5089A1L3C8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm5089A1L3C8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Gm5089A1L3C8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm5089A1L3C8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.15■□□□□ 0.18
Gm5089A1L3C8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.15■□□□□ 0.18
Gm5089A1L3C8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.15■□□□□ 0.18
Gm5089A1L3C8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.15■□□□□ 0.18
Gm5089A1L3C8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm5089A1L3C8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm5089A1L3C8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm5089A1L3C8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm5089A1L3C8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm5089A1L3C8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Gm5089A1L3C8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.14■□□□□ 0.17
Gm5089A1L3C8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm5089A1L3C8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm5089A1L3C8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm5089A1L3C8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm5089A1L3C8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.14■□□□□ 0.17
Gm5089A1L3C8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.14■□□□□ 0.17
Gm5089A1L3C8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm5089A1L3C8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm5089A1L3C8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm5089A1L3C8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm5089A1L3C8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm5089A1L3C8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm5089A1L3C8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.13■□□□□ 0.17
Gm5089A1L3C8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.13■□□□□ 0.17
Gm5089A1L3C8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Gm5089A1L3C8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm5089A1L3C8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm5089A1L3C8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm5089A1L3C8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm5089A1L3C8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm5089A1L3C8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm5089A1L3C8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm5089A1L3C8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Gm5089A1L3C8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5089A1L3C8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5089A1L3C8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Gm5089A1L3C8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5089A1L3C8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5089A1L3C8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5089A1L3C8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5089A1L3C8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5089A1L3C8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5089A1L3C8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5089A1L3C8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5089A1L3C8 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms