Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3854A0A1B0GSS6 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3854A0A1B0GSS6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3854A0A1B0GSS6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3854A0A1B0GSS6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3854A0A1B0GSS6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3854A0A1B0GSS6 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3854A0A1B0GSS6 Gm10849-201ENSMUST00000100397 618 ntBASIC20.23■□□□□ 0.83
Gm3854A0A1B0GSS6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3854A0A1B0GSS6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3854A0A1B0GSS6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3854A0A1B0GSS6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Gm3854A0A1B0GSS6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.22■□□□□ 0.83
Gm3854A0A1B0GSS6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3854A0A1B0GSS6 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3854A0A1B0GSS6 Gm11421-201ENSMUST00000122124 294 ntBASIC20.22■□□□□ 0.83
Gm3854A0A1B0GSS6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.22■□□□□ 0.83
Gm3854A0A1B0GSS6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3854A0A1B0GSS6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3854A0A1B0GSS6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3854A0A1B0GSS6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3854A0A1B0GSS6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3854A0A1B0GSS6 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3854A0A1B0GSS6 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3854A0A1B0GSS6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3854A0A1B0GSS6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3854A0A1B0GSS6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Gm3854A0A1B0GSS6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3854A0A1B0GSS6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3854A0A1B0GSS6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3854A0A1B0GSS6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Gm3854A0A1B0GSS6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3854A0A1B0GSS6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3854A0A1B0GSS6 Gm42778-201ENSMUST00000199644 553 ntBASIC20.2■□□□□ 0.82
Gm3854A0A1B0GSS6 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3854A0A1B0GSS6 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3854A0A1B0GSS6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3854A0A1B0GSS6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3854A0A1B0GSS6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3854A0A1B0GSS6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
Gm3854A0A1B0GSS6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3854A0A1B0GSS6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3854A0A1B0GSS6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3854A0A1B0GSS6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.19■□□□□ 0.82
Gm3854A0A1B0GSS6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3854A0A1B0GSS6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3854A0A1B0GSS6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3854A0A1B0GSS6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Gm3854A0A1B0GSS6 Gm37179-201ENSMUST00000194862 823 ntBASIC20.19■□□□□ 0.82
Gm3854A0A1B0GSS6 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Gm3854A0A1B0GSS6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3854A0A1B0GSS6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3854A0A1B0GSS6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3854A0A1B0GSS6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Gm3854A0A1B0GSS6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Gm3854A0A1B0GSS6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.19■□□□□ 0.82
Gm3854A0A1B0GSS6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3854A0A1B0GSS6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Gm3854A0A1B0GSS6 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm3854A0A1B0GSS6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Gm3854A0A1B0GSS6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm3854A0A1B0GSS6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Gm3854A0A1B0GSS6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm3854A0A1B0GSS6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.18■□□□□ 0.82
Gm3854A0A1B0GSS6 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Gm3854A0A1B0GSS6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Gm3854A0A1B0GSS6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm3854A0A1B0GSS6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm3854A0A1B0GSS6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm3854A0A1B0GSS6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm3854A0A1B0GSS6 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm3854A0A1B0GSS6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm3854A0A1B0GSS6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm3854A0A1B0GSS6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.17■□□□□ 0.82
Gm3854A0A1B0GSS6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm3854A0A1B0GSS6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm3854A0A1B0GSS6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm3854A0A1B0GSS6 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.16■□□□□ 0.82
Gm3854A0A1B0GSS6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.16■□□□□ 0.82
Gm3854A0A1B0GSS6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm3854A0A1B0GSS6 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm3854A0A1B0GSS6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm3854A0A1B0GSS6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Gm3854A0A1B0GSS6 AV356131-201ENSMUST00000206201 750 ntBASIC20.15■□□□□ 0.82
Gm3854A0A1B0GSS6 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Gm3854A0A1B0GSS6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.15■□□□□ 0.82
Gm3854A0A1B0GSS6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm3854A0A1B0GSS6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm3854A0A1B0GSS6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm3854A0A1B0GSS6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Gm3854A0A1B0GSS6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm3854A0A1B0GSS6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm3854A0A1B0GSS6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.15■□□□□ 0.82
Gm3854A0A1B0GSS6 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.14■□□□□ 0.82
Gm3854A0A1B0GSS6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm3854A0A1B0GSS6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Gm3854A0A1B0GSS6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm3854A0A1B0GSS6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm3854A0A1B0GSS6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.14■□□□□ 0.81
Gm3854A0A1B0GSS6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms