Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igkv1-88A0A140T8N1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Igkv1-88A0A140T8N1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igkv1-88A0A140T8N1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igkv1-88A0A140T8N1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
Igkv1-88A0A140T8N1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv1-88A0A140T8N1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv1-88A0A140T8N1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv1-88A0A140T8N1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv1-88A0A140T8N1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv1-88A0A140T8N1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv1-88A0A140T8N1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv1-88A0A140T8N1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv1-88A0A140T8N1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv1-88A0A140T8N1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Igkv1-88A0A140T8N1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv1-88A0A140T8N1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv1-88A0A140T8N1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv1-88A0A140T8N1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv1-88A0A140T8N1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv1-88A0A140T8N1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv1-88A0A140T8N1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv1-88A0A140T8N1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv1-88A0A140T8N1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv1-88A0A140T8N1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv1-88A0A140T8N1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Igkv1-88A0A140T8N1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Igkv1-88A0A140T8N1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv1-88A0A140T8N1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv1-88A0A140T8N1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv1-88A0A140T8N1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC13.23□□□□□ -0.29
Igkv1-88A0A140T8N1 AC116713.1-201ENSMUST00000215074 430 ntBASIC13.23□□□□□ -0.29
Igkv1-88A0A140T8N1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC13.23□□□□□ -0.29
Igkv1-88A0A140T8N1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv1-88A0A140T8N1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv1-88A0A140T8N1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv1-88A0A140T8N1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv1-88A0A140T8N1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Igkv1-88A0A140T8N1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv1-88A0A140T8N1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv1-88A0A140T8N1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv1-88A0A140T8N1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Igkv1-88A0A140T8N1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv1-88A0A140T8N1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv1-88A0A140T8N1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv1-88A0A140T8N1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv1-88A0A140T8N1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv1-88A0A140T8N1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv1-88A0A140T8N1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv1-88A0A140T8N1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv1-88A0A140T8N1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv1-88A0A140T8N1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC13.22□□□□□ -0.29
Igkv1-88A0A140T8N1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC13.22□□□□□ -0.29
Igkv1-88A0A140T8N1 Gm43592-201ENSMUST00000196922 1165 ntBASIC13.22□□□□□ -0.29
Igkv1-88A0A140T8N1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv1-88A0A140T8N1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv1-88A0A140T8N1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv1-88A0A140T8N1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv1-88A0A140T8N1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv1-88A0A140T8N1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv1-88A0A140T8N1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv1-88A0A140T8N1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv1-88A0A140T8N1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv1-88A0A140T8N1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Igkv1-88A0A140T8N1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv1-88A0A140T8N1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Igkv1-88A0A140T8N1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Igkv1-88A0A140T8N1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Igkv1-88A0A140T8N1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Igkv1-88A0A140T8N1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Igkv1-88A0A140T8N1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Igkv1-88A0A140T8N1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Igkv1-88A0A140T8N1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Igkv1-88A0A140T8N1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Igkv1-88A0A140T8N1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Igkv1-88A0A140T8N1 Gm11175-201ENSMUST00000116172 543 ntBASIC13.21□□□□□ -0.29
Igkv1-88A0A140T8N1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Igkv1-88A0A140T8N1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Igkv1-88A0A140T8N1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Igkv1-88A0A140T8N1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Igkv1-88A0A140T8N1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Igkv1-88A0A140T8N1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Igkv1-88A0A140T8N1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC13.21□□□□□ -0.3
Igkv1-88A0A140T8N1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Igkv1-88A0A140T8N1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Igkv1-88A0A140T8N1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Igkv1-88A0A140T8N1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Igkv1-88A0A140T8N1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Igkv1-88A0A140T8N1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Igkv1-88A0A140T8N1 Gm11847-201ENSMUST00000125165 1119 ntBASIC13.2□□□□□ -0.3
Igkv1-88A0A140T8N1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Igkv1-88A0A140T8N1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Igkv1-88A0A140T8N1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Igkv1-88A0A140T8N1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Igkv1-88A0A140T8N1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Igkv1-88A0A140T8N1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Igkv1-88A0A140T8N1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Igkv1-88A0A140T8N1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Igkv1-88A0A140T8N1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Igkv1-88A0A140T8N1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms