Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv3-5A0A140T8M6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Igkv3-5A0A140T8M6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC12.68□□□□□ -0.38
Igkv3-5A0A140T8M6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv3-5A0A140T8M6 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv3-5A0A140T8M6 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv3-5A0A140T8M6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv3-5A0A140T8M6 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv3-5A0A140T8M6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv3-5A0A140T8M6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv3-5A0A140T8M6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv3-5A0A140T8M6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Igkv3-5A0A140T8M6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv3-5A0A140T8M6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Igkv3-5A0A140T8M6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv3-5A0A140T8M6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv3-5A0A140T8M6 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv3-5A0A140T8M6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC12.67□□□□□ -0.38
Igkv3-5A0A140T8M6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC12.67□□□□□ -0.38
Igkv3-5A0A140T8M6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv3-5A0A140T8M6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv3-5A0A140T8M6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv3-5A0A140T8M6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv3-5A0A140T8M6 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
Igkv3-5A0A140T8M6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC12.66□□□□□ -0.38
Igkv3-5A0A140T8M6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv3-5A0A140T8M6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv3-5A0A140T8M6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Igkv3-5A0A140T8M6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv3-5A0A140T8M6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv3-5A0A140T8M6 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv3-5A0A140T8M6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Igkv3-5A0A140T8M6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv3-5A0A140T8M6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv3-5A0A140T8M6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC12.66□□□□□ -0.38
Igkv3-5A0A140T8M6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv3-5A0A140T8M6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Igkv3-5A0A140T8M6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv3-5A0A140T8M6 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv3-5A0A140T8M6 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-5A0A140T8M6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC12.65□□□□□ -0.38
Igkv3-5A0A140T8M6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Igkv3-5A0A140T8M6 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-5A0A140T8M6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-5A0A140T8M6 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-5A0A140T8M6 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-5A0A140T8M6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-5A0A140T8M6 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Igkv3-5A0A140T8M6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-5A0A140T8M6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC12.65□□□□□ -0.38
Igkv3-5A0A140T8M6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC12.65□□□□□ -0.38
Igkv3-5A0A140T8M6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-5A0A140T8M6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-5A0A140T8M6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-5A0A140T8M6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-5A0A140T8M6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-5A0A140T8M6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-5A0A140T8M6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-5A0A140T8M6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-5A0A140T8M6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-5A0A140T8M6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-5A0A140T8M6 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-5A0A140T8M6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-5A0A140T8M6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv3-5A0A140T8M6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv3-5A0A140T8M6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv3-5A0A140T8M6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv3-5A0A140T8M6 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Igkv3-5A0A140T8M6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv3-5A0A140T8M6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Igkv3-5A0A140T8M6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv3-5A0A140T8M6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv3-5A0A140T8M6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv3-5A0A140T8M6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv3-5A0A140T8M6 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv3-5A0A140T8M6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv3-5A0A140T8M6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv3-5A0A140T8M6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv3-5A0A140T8M6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv3-5A0A140T8M6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv3-5A0A140T8M6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv3-5A0A140T8M6 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv3-5A0A140T8M6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv3-5A0A140T8M6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv3-5A0A140T8M6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv3-5A0A140T8M6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC12.63□□□□□ -0.39
Igkv3-5A0A140T8M6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Igkv3-5A0A140T8M6 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv3-5A0A140T8M6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv3-5A0A140T8M6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv3-5A0A140T8M6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv3-5A0A140T8M6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Igkv3-5A0A140T8M6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv3-5A0A140T8M6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Igkv3-5A0A140T8M6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv3-5A0A140T8M6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv3-5A0A140T8M6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv3-5A0A140T8M6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv3-5A0A140T8M6 Gm8093-201ENSMUST00000128935 1892 ntBASIC12.62□□□□□ -0.39
Igkv3-5A0A140T8M6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms