Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cfap99A0A140LIX9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cfap99A0A140LIX9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cfap99A0A140LIX9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cfap99A0A140LIX9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cfap99A0A140LIX9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cfap99A0A140LIX9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cfap99A0A140LIX9 Gm8770-201ENSMUST00000121113 1109 ntBASIC24.04■■□□□ 1.44
Cfap99A0A140LIX9 Wdr70-203ENSMUST00000227371 1130 ntBASIC24.04■■□□□ 1.44
Cfap99A0A140LIX9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cfap99A0A140LIX9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cfap99A0A140LIX9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cfap99A0A140LIX9 Gm4430-201ENSMUST00000192413 1943 ntBASIC24.04■■□□□ 1.44
Cfap99A0A140LIX9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Cfap99A0A140LIX9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Cfap99A0A140LIX9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
Cfap99A0A140LIX9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Cfap99A0A140LIX9 Gm5913-201ENSMUST00000119397 1399 ntBASIC24.03■■□□□ 1.44
Cfap99A0A140LIX9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Cfap99A0A140LIX9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC24.02■■□□□ 1.44
Cfap99A0A140LIX9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Cfap99A0A140LIX9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC24.02■■□□□ 1.44
Cfap99A0A140LIX9 Gm43759-201ENSMUST00000196925 1261 ntBASIC24.02■■□□□ 1.44
Cfap99A0A140LIX9 Gm7143-201ENSMUST00000222811 859 ntBASIC24.02■■□□□ 1.44
Cfap99A0A140LIX9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Cfap99A0A140LIX9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Cfap99A0A140LIX9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cfap99A0A140LIX9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cfap99A0A140LIX9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Cfap99A0A140LIX9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cfap99A0A140LIX9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC24■■□□□ 1.43
Cfap99A0A140LIX9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Cfap99A0A140LIX9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Cfap99A0A140LIX9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Cfap99A0A140LIX9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Cfap99A0A140LIX9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC23.99■■□□□ 1.43
Cfap99A0A140LIX9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC23.99■■□□□ 1.43
Cfap99A0A140LIX9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cfap99A0A140LIX9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC23.99■■□□□ 1.43
Cfap99A0A140LIX9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cfap99A0A140LIX9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Cfap99A0A140LIX9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Cfap99A0A140LIX9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC23.98■■□□□ 1.43
Cfap99A0A140LIX9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cfap99A0A140LIX9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Cfap99A0A140LIX9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cfap99A0A140LIX9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Cfap99A0A140LIX9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cfap99A0A140LIX9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cfap99A0A140LIX9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Cfap99A0A140LIX9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cfap99A0A140LIX9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cfap99A0A140LIX9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cfap99A0A140LIX9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC23.97■■□□□ 1.43
Cfap99A0A140LIX9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Cfap99A0A140LIX9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC23.97■■□□□ 1.43
Cfap99A0A140LIX9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC23.97■■□□□ 1.43
Cfap99A0A140LIX9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cfap99A0A140LIX9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Cfap99A0A140LIX9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Cfap99A0A140LIX9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cfap99A0A140LIX9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cfap99A0A140LIX9 Gm5874-201ENSMUST00000096101 508 ntBASIC23.97■■□□□ 1.43
Cfap99A0A140LIX9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cfap99A0A140LIX9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cfap99A0A140LIX9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Cfap99A0A140LIX9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cfap99A0A140LIX9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Cfap99A0A140LIX9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cfap99A0A140LIX9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Cfap99A0A140LIX9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC23.96■■□□□ 1.43
Cfap99A0A140LIX9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
Cfap99A0A140LIX9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
Cfap99A0A140LIX9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
Cfap99A0A140LIX9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Cfap99A0A140LIX9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
Cfap99A0A140LIX9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Cfap99A0A140LIX9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Cfap99A0A140LIX9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Cfap99A0A140LIX9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Cfap99A0A140LIX9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Cfap99A0A140LIX9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Cfap99A0A140LIX9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Cfap99A0A140LIX9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cfap99A0A140LIX9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cfap99A0A140LIX9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cfap99A0A140LIX9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cfap99A0A140LIX9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cfap99A0A140LIX9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Cfap99A0A140LIX9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cfap99A0A140LIX9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cfap99A0A140LIX9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cfap99A0A140LIX9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cfap99A0A140LIX9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cfap99A0A140LIX9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Cfap99A0A140LIX9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC23.93■■□□□ 1.42
Cfap99A0A140LIX9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cfap99A0A140LIX9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cfap99A0A140LIX9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cfap99A0A140LIX9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms