Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav9d-4A0A0G2JG37 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav9d-4A0A0G2JG37 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav9d-4A0A0G2JG37 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9d-4A0A0G2JG37 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav9d-4A0A0G2JG37 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9d-4A0A0G2JG37 Gm11687-201ENSMUST00000118911 886 ntBASIC13.76□□□□□ -0.21
Trav9d-4A0A0G2JG37 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC13.76□□□□□ -0.21
Trav9d-4A0A0G2JG37 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9d-4A0A0G2JG37 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9d-4A0A0G2JG37 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
Trav9d-4A0A0G2JG37 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9d-4A0A0G2JG37 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9d-4A0A0G2JG37 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav9d-4A0A0G2JG37 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav9d-4A0A0G2JG37 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-4A0A0G2JG37 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Trav9d-4A0A0G2JG37 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-4A0A0G2JG37 AC158990.1-201ENSMUST00000221450 2016 ntBASIC13.75□□□□□ -0.21
Trav9d-4A0A0G2JG37 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav9d-4A0A0G2JG37 Scarna2-201ENSMUST00000157560 414 ntBASIC13.75□□□□□ -0.21
Trav9d-4A0A0G2JG37 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-4A0A0G2JG37 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-4A0A0G2JG37 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-4A0A0G2JG37 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-4A0A0G2JG37 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav9d-4A0A0G2JG37 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Trav9d-4A0A0G2JG37 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-4A0A0G2JG37 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-4A0A0G2JG37 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-4A0A0G2JG37 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-4A0A0G2JG37 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-4A0A0G2JG37 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-4A0A0G2JG37 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav9d-4A0A0G2JG37 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav9d-4A0A0G2JG37 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-4A0A0G2JG37 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Trav9d-4A0A0G2JG37 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-4A0A0G2JG37 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Trav9d-4A0A0G2JG37 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-4A0A0G2JG37 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-4A0A0G2JG37 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav9d-4A0A0G2JG37 Gm43545-201ENSMUST00000196765 2779 ntBASIC13.73□□□□□ -0.21
Trav9d-4A0A0G2JG37 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav9d-4A0A0G2JG37 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav9d-4A0A0G2JG37 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-4A0A0G2JG37 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-4A0A0G2JG37 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-4A0A0G2JG37 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Trav9d-4A0A0G2JG37 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav9d-4A0A0G2JG37 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-4A0A0G2JG37 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-4A0A0G2JG37 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Trav9d-4A0A0G2JG37 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav9d-4A0A0G2JG37 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-4A0A0G2JG37 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-4A0A0G2JG37 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-4A0A0G2JG37 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav9d-4A0A0G2JG37 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-4A0A0G2JG37 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav9d-4A0A0G2JG37 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-4A0A0G2JG37 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC13.72□□□□□ -0.21
Trav9d-4A0A0G2JG37 Gm16437-201ENSMUST00000025669 507 ntBASIC13.72□□□□□ -0.21
Trav9d-4A0A0G2JG37 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav9d-4A0A0G2JG37 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-4A0A0G2JG37 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-4A0A0G2JG37 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav9d-4A0A0G2JG37 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-4A0A0G2JG37 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC13.72□□□□□ -0.21
Trav9d-4A0A0G2JG37 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-4A0A0G2JG37 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9d-4A0A0G2JG37 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9d-4A0A0G2JG37 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9d-4A0A0G2JG37 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9d-4A0A0G2JG37 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9d-4A0A0G2JG37 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9d-4A0A0G2JG37 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav9d-4A0A0G2JG37 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav9d-4A0A0G2JG37 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav9d-4A0A0G2JG37 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav9d-4A0A0G2JG37 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-4A0A0G2JG37 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-4A0A0G2JG37 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-4A0A0G2JG37 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-4A0A0G2JG37 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-4A0A0G2JG37 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-4A0A0G2JG37 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-4A0A0G2JG37 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-4A0A0G2JG37 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-4A0A0G2JG37 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-4A0A0G2JG37 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-4A0A0G2JG37 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-4A0A0G2JG37 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-4A0A0G2JG37 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-4A0A0G2JG37 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-4A0A0G2JG37 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-4A0A0G2JG37 AC122428.2-201ENSMUST00000216321 1832 ntBASIC13.69□□□□□ -0.22
Trav9d-4A0A0G2JG37 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav9d-4A0A0G2JG37 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-4A0A0G2JG37 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms