Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC14.2□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.2□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Gm18755-201ENSMUST00000218030 1099 ntBASIC14.2□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Gm15820-201ENSMUST00000201566 728 ntBASIC14.19□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igkv4-53A0A0G2JFC6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Notumos-201ENSMUST00000151998 2659 ntBASIC14.19□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC14.19□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Gm5522-201ENSMUST00000189483 1242 ntBASIC14.18□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Gm5812-201ENSMUST00000061073 957 ntBASIC14.18□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.17□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC14.17□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.17□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.16□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.16□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Gm40881-201ENSMUST00000223397 166 ntBASIC14.16□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.15□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Igkv4-53A0A0G2JFC6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.15□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Igkv4-53A0A0G2JFC6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC14.14□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.14□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Igkv4-53A0A0G2JFC6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.14□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.14□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Gm42501-201ENSMUST00000200220 1026 ntBASIC14.13□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv4-53A0A0G2JFC6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv4-53A0A0G2JFC6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms