Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav7-1A0A0G2JEV5 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav7-1A0A0G2JEV5 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav7-1A0A0G2JEV5 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav7-1A0A0G2JEV5 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trav7-1A0A0G2JEV5 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.49■□□□□ 0.07
Trav7-1A0A0G2JEV5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav7-1A0A0G2JEV5 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav7-1A0A0G2JEV5 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.48■□□□□ 0.07
Trav7-1A0A0G2JEV5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7-1A0A0G2JEV5 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7-1A0A0G2JEV5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7-1A0A0G2JEV5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trav7-1A0A0G2JEV5 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7-1A0A0G2JEV5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7-1A0A0G2JEV5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7-1A0A0G2JEV5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trav7-1A0A0G2JEV5 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7-1A0A0G2JEV5 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7-1A0A0G2JEV5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC15.47■□□□□ 0.07
Trav7-1A0A0G2JEV5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7-1A0A0G2JEV5 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7-1A0A0G2JEV5 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav7-1A0A0G2JEV5 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7-1A0A0G2JEV5 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7-1A0A0G2JEV5 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7-1A0A0G2JEV5 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7-1A0A0G2JEV5 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7-1A0A0G2JEV5 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7-1A0A0G2JEV5 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7-1A0A0G2JEV5 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7-1A0A0G2JEV5 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav7-1A0A0G2JEV5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav7-1A0A0G2JEV5 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.46■□□□□ 0.06
Trav7-1A0A0G2JEV5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav7-1A0A0G2JEV5 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7-1A0A0G2JEV5 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav7-1A0A0G2JEV5 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav7-1A0A0G2JEV5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.45■□□□□ 0.06
Trav7-1A0A0G2JEV5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7-1A0A0G2JEV5 Gm45444-201ENSMUST00000211394 898 ntBASIC15.45■□□□□ 0.06
Trav7-1A0A0G2JEV5 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trav7-1A0A0G2JEV5 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7-1A0A0G2JEV5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7-1A0A0G2JEV5 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7-1A0A0G2JEV5 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7-1A0A0G2JEV5 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7-1A0A0G2JEV5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav7-1A0A0G2JEV5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7-1A0A0G2JEV5 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7-1A0A0G2JEV5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-1A0A0G2JEV5 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-1A0A0G2JEV5 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-1A0A0G2JEV5 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-1A0A0G2JEV5 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-1A0A0G2JEV5 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.44■□□□□ 0.06
Trav7-1A0A0G2JEV5 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.44■□□□□ 0.06
Trav7-1A0A0G2JEV5 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav7-1A0A0G2JEV5 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.44■□□□□ 0.06
Trav7-1A0A0G2JEV5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-1A0A0G2JEV5 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-1A0A0G2JEV5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Trav7-1A0A0G2JEV5 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-1A0A0G2JEV5 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-1A0A0G2JEV5 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7-1A0A0G2JEV5 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.43■□□□□ 0.06
Trav7-1A0A0G2JEV5 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7-1A0A0G2JEV5 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7-1A0A0G2JEV5 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7-1A0A0G2JEV5 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7-1A0A0G2JEV5 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7-1A0A0G2JEV5 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7-1A0A0G2JEV5 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav7-1A0A0G2JEV5 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7-1A0A0G2JEV5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7-1A0A0G2JEV5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7-1A0A0G2JEV5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7-1A0A0G2JEV5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7-1A0A0G2JEV5 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav7-1A0A0G2JEV5 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7-1A0A0G2JEV5 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7-1A0A0G2JEV5 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
Trav7-1A0A0G2JEV5 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav7-1A0A0G2JEV5 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav7-1A0A0G2JEV5 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7-1A0A0G2JEV5 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7-1A0A0G2JEV5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7-1A0A0G2JEV5 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7-1A0A0G2JEV5 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7-1A0A0G2JEV5 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.41■□□□□ 0.06
Trav7-1A0A0G2JEV5 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7-1A0A0G2JEV5 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7-1A0A0G2JEV5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7-1A0A0G2JEV5 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7-1A0A0G2JEV5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7-1A0A0G2JEV5 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7-1A0A0G2JEV5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7-1A0A0G2JEV5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7-1A0A0G2JEV5 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7-1A0A0G2JEV5 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms