Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC14.91□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.91□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Gm21956-201ENSMUST00000179946 522 ntBASIC14.89□□□□□ -0.03
Trbv13-1A0A0B4J1P8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC14.89□□□□□ -0.03
Trbv13-1A0A0B4J1P8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.88□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.88□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-1A0A0B4J1P8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.87□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-1A0A0B4J1P8 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.87□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trbv13-1A0A0B4J1P8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.86□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.86□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.86□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.85□□□□□ -0.03
Trbv13-1A0A0B4J1P8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-1A0A0B4J1P8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.85□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.85□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Golph3-202ENSMUST00000226517 2359 ntBASIC14.85□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-1A0A0B4J1P8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-1A0A0B4J1P8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC14.84□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC14.84□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.84□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms