Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
Trav4-3A0A0B4J1K1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-3A0A0B4J1K1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-3A0A0B4J1K1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC13.73□□□□□ -0.21
Trav4-3A0A0B4J1K1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-3A0A0B4J1K1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-3A0A0B4J1K1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-3A0A0B4J1K1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-3A0A0B4J1K1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-3A0A0B4J1K1 Nsd1-206ENSMUST00000224918 1001 ntBASIC13.72□□□□□ -0.21
Trav4-3A0A0B4J1K1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-3A0A0B4J1K1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav4-3A0A0B4J1K1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-3A0A0B4J1K1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-3A0A0B4J1K1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-3A0A0B4J1K1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-3A0A0B4J1K1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-3A0A0B4J1K1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-3A0A0B4J1K1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-3A0A0B4J1K1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-3A0A0B4J1K1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-3A0A0B4J1K1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-3A0A0B4J1K1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-3A0A0B4J1K1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-3A0A0B4J1K1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-3A0A0B4J1K1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-3A0A0B4J1K1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-3A0A0B4J1K1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-3A0A0B4J1K1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC13.71□□□□□ -0.21
Trav4-3A0A0B4J1K1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-3A0A0B4J1K1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav4-3A0A0B4J1K1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Trav4-3A0A0B4J1K1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC13.71□□□□□ -0.22
Trav4-3A0A0B4J1K1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav4-3A0A0B4J1K1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trav4-3A0A0B4J1K1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav4-3A0A0B4J1K1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav4-3A0A0B4J1K1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav4-3A0A0B4J1K1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC13.71□□□□□ -0.22
Trav4-3A0A0B4J1K1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-3A0A0B4J1K1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-3A0A0B4J1K1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-3A0A0B4J1K1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC13.7□□□□□ -0.22
Trav4-3A0A0B4J1K1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-3A0A0B4J1K1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav4-3A0A0B4J1K1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-3A0A0B4J1K1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-3A0A0B4J1K1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-3A0A0B4J1K1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-3A0A0B4J1K1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav4-3A0A0B4J1K1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-3A0A0B4J1K1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-3A0A0B4J1K1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-3A0A0B4J1K1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-3A0A0B4J1K1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav4-3A0A0B4J1K1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-3A0A0B4J1K1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-3A0A0B4J1K1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav4-3A0A0B4J1K1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-3A0A0B4J1K1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-3A0A0B4J1K1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-3A0A0B4J1K1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-3A0A0B4J1K1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC13.69□□□□□ -0.22
Trav4-3A0A0B4J1K1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC13.69□□□□□ -0.22
Trav4-3A0A0B4J1K1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-3A0A0B4J1K1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-3A0A0B4J1K1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-3A0A0B4J1K1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-3A0A0B4J1K1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-3A0A0B4J1K1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-3A0A0B4J1K1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-3A0A0B4J1K1 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-3A0A0B4J1K1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav4-3A0A0B4J1K1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav4-3A0A0B4J1K1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav4-3A0A0B4J1K1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Trav4-3A0A0B4J1K1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4-3A0A0B4J1K1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4-3A0A0B4J1K1 Pkd1-207ENSMUST00000228550 1050 ntBASIC13.68□□□□□ -0.22
Trav4-3A0A0B4J1K1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav4-3A0A0B4J1K1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav4-3A0A0B4J1K1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4-3A0A0B4J1K1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav4-3A0A0B4J1K1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav4-3A0A0B4J1K1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav4-3A0A0B4J1K1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-3A0A0B4J1K1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav4-3A0A0B4J1K1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-3A0A0B4J1K1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-3A0A0B4J1K1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-3A0A0B4J1K1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav4-3A0A0B4J1K1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-3A0A0B4J1K1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-3A0A0B4J1K1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-3A0A0B4J1K1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-3A0A0B4J1K1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-3A0A0B4J1K1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Trav4-3A0A0B4J1K1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-3A0A0B4J1K1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-3A0A0B4J1K1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms