Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Trbv2A0A0B4J1G8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trbv2A0A0B4J1G8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.89■□□□□ 0.45
Trbv2A0A0B4J1G8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv2A0A0B4J1G8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv2A0A0B4J1G8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv2A0A0B4J1G8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv2A0A0B4J1G8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.88■□□□□ 0.45
Trbv2A0A0B4J1G8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv2A0A0B4J1G8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv2A0A0B4J1G8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trbv2A0A0B4J1G8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv2A0A0B4J1G8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv2A0A0B4J1G8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv2A0A0B4J1G8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv2A0A0B4J1G8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv2A0A0B4J1G8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.87■□□□□ 0.45
Trbv2A0A0B4J1G8 Gm12366-201ENSMUST00000121722 873 ntBASIC17.87■□□□□ 0.45
Trbv2A0A0B4J1G8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.87■□□□□ 0.45
Trbv2A0A0B4J1G8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv2A0A0B4J1G8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.87■□□□□ 0.45
Trbv2A0A0B4J1G8 Gm5786-201ENSMUST00000085368 882 ntBASIC17.87■□□□□ 0.45
Trbv2A0A0B4J1G8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv2A0A0B4J1G8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv2A0A0B4J1G8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv2A0A0B4J1G8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.87■□□□□ 0.45
Trbv2A0A0B4J1G8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv2A0A0B4J1G8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv2A0A0B4J1G8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv2A0A0B4J1G8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv2A0A0B4J1G8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv2A0A0B4J1G8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv2A0A0B4J1G8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv2A0A0B4J1G8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.86■□□□□ 0.45
Trbv2A0A0B4J1G8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv2A0A0B4J1G8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv2A0A0B4J1G8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv2A0A0B4J1G8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.86■□□□□ 0.45
Trbv2A0A0B4J1G8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv2A0A0B4J1G8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv2A0A0B4J1G8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv2A0A0B4J1G8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.85■□□□□ 0.45
Trbv2A0A0B4J1G8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv2A0A0B4J1G8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv2A0A0B4J1G8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv2A0A0B4J1G8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv2A0A0B4J1G8 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.85■□□□□ 0.45
Trbv2A0A0B4J1G8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv2A0A0B4J1G8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv2A0A0B4J1G8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv2A0A0B4J1G8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trbv2A0A0B4J1G8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Trbv2A0A0B4J1G8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trbv2A0A0B4J1G8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv2A0A0B4J1G8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.84■□□□□ 0.45
Trbv2A0A0B4J1G8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv2A0A0B4J1G8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.84■□□□□ 0.45
Trbv2A0A0B4J1G8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv2A0A0B4J1G8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv2A0A0B4J1G8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trbv2A0A0B4J1G8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.83■□□□□ 0.45
Trbv2A0A0B4J1G8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trbv2A0A0B4J1G8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trbv2A0A0B4J1G8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trbv2A0A0B4J1G8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Trbv2A0A0B4J1G8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Trbv2A0A0B4J1G8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv2A0A0B4J1G8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv2A0A0B4J1G8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv2A0A0B4J1G8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv2A0A0B4J1G8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trbv2A0A0B4J1G8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv2A0A0B4J1G8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv2A0A0B4J1G8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv2A0A0B4J1G8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv2A0A0B4J1G8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv2A0A0B4J1G8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv2A0A0B4J1G8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.82■□□□□ 0.44
Trbv2A0A0B4J1G8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trbv2A0A0B4J1G8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv2A0A0B4J1G8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv2A0A0B4J1G8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.81■□□□□ 0.44
Trbv2A0A0B4J1G8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv2A0A0B4J1G8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.81■□□□□ 0.44
Trbv2A0A0B4J1G8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv2A0A0B4J1G8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv2A0A0B4J1G8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.81■□□□□ 0.44
Trbv2A0A0B4J1G8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv2A0A0B4J1G8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv2A0A0B4J1G8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv2A0A0B4J1G8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv2A0A0B4J1G8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv2A0A0B4J1G8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv2A0A0B4J1G8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv2A0A0B4J1G8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv2A0A0B4J1G8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv2A0A0B4J1G8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv2A0A0B4J1G8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv2A0A0B4J1G8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv2A0A0B4J1G8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms