Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sirpb1aA0A0A6YYP6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sirpb1aA0A0A6YYP6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.03■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.03■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
Sirpb1aA0A0A6YYP6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.02■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.02■□□□□ 0.64
Sirpb1aA0A0A6YYP6 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19■□□□□ 0.63
Sirpb1aA0A0A6YYP6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.99■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.97■□□□□ 0.63
Sirpb1aA0A0A6YYP6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.96■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.96■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sirpb1aA0A0A6YYP6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Sirpb1aA0A0A6YYP6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.95■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms