Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.62■□□□□ 0.25
Ighv1-47A0A0A6YY41 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.62■□□□□ 0.25
Ighv1-47A0A0A6YY41 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.62■□□□□ 0.25
Ighv1-47A0A0A6YY41 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-47A0A0A6YY41 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-47A0A0A6YY41 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-47A0A0A6YY41 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-47A0A0A6YY41 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.61■□□□□ 0.25
Ighv1-47A0A0A6YY41 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-47A0A0A6YY41 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-47A0A0A6YY41 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-47A0A0A6YY41 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-47A0A0A6YY41 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ighv1-47A0A0A6YY41 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-47A0A0A6YY41 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-47A0A0A6YY41 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-47A0A0A6YY41 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-47A0A0A6YY41 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
Ighv1-47A0A0A6YY41 Gm15546-201ENSMUST00000122095 826 ntBASIC16.6■□□□□ 0.25
Ighv1-47A0A0A6YY41 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.6■□□□□ 0.25
Ighv1-47A0A0A6YY41 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.6■□□□□ 0.25
Ighv1-47A0A0A6YY41 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.6■□□□□ 0.25
Ighv1-47A0A0A6YY41 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-47A0A0A6YY41 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.6■□□□□ 0.25
Ighv1-47A0A0A6YY41 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-47A0A0A6YY41 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-47A0A0A6YY41 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ighv1-47A0A0A6YY41 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ighv1-47A0A0A6YY41 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.59■□□□□ 0.25
Ighv1-47A0A0A6YY41 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.59■□□□□ 0.25
Ighv1-47A0A0A6YY41 Gm40881-201ENSMUST00000223397 166 ntBASIC16.59■□□□□ 0.25
Ighv1-47A0A0A6YY41 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-47A0A0A6YY41 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-47A0A0A6YY41 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-47A0A0A6YY41 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-47A0A0A6YY41 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.59■□□□□ 0.25
Ighv1-47A0A0A6YY41 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-47A0A0A6YY41 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ighv1-47A0A0A6YY41 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.58■□□□□ 0.24
Ighv1-47A0A0A6YY41 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-47A0A0A6YY41 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-47A0A0A6YY41 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-47A0A0A6YY41 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.58■□□□□ 0.24
Ighv1-47A0A0A6YY41 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-47A0A0A6YY41 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-47A0A0A6YY41 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-47A0A0A6YY41 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-47A0A0A6YY41 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ighv1-47A0A0A6YY41 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.57■□□□□ 0.24
Ighv1-47A0A0A6YY41 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-47A0A0A6YY41 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-47A0A0A6YY41 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-47A0A0A6YY41 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-47A0A0A6YY41 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ighv1-47A0A0A6YY41 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-47A0A0A6YY41 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-47A0A0A6YY41 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-47A0A0A6YY41 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.56■□□□□ 0.24
Ighv1-47A0A0A6YY41 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-47A0A0A6YY41 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-47A0A0A6YY41 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-47A0A0A6YY41 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ighv1-47A0A0A6YY41 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-47A0A0A6YY41 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.56■□□□□ 0.24
Ighv1-47A0A0A6YY41 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-47A0A0A6YY41 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-47A0A0A6YY41 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-47A0A0A6YY41 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.55■□□□□ 0.24
Ighv1-47A0A0A6YY41 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-47A0A0A6YY41 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-47A0A0A6YY41 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ighv1-47A0A0A6YY41 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ighv1-47A0A0A6YY41 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-47A0A0A6YY41 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ighv1-47A0A0A6YY41 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.55■□□□□ 0.24
Ighv1-47A0A0A6YY41 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-47A0A0A6YY41 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-47A0A0A6YY41 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.54■□□□□ 0.24
Ighv1-47A0A0A6YY41 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Ighv1-47A0A0A6YY41 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Ighv1-47A0A0A6YY41 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-47A0A0A6YY41 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-47A0A0A6YY41 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-47A0A0A6YY41 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-47A0A0A6YY41 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-47A0A0A6YY41 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-47A0A0A6YY41 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-47A0A0A6YY41 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-47A0A0A6YY41 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-47A0A0A6YY41 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-47A0A0A6YY41 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.53■□□□□ 0.24
Ighv1-47A0A0A6YY41 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv1-47A0A0A6YY41 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv1-47A0A0A6YY41 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv1-47A0A0A6YY41 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv1-47A0A0A6YY41 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.53■□□□□ 0.24
Ighv1-47A0A0A6YY41 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv1-47A0A0A6YY41 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv1-47A0A0A6YY41 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv1-47A0A0A6YY41 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms