Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav6-5A0A075B6B5 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-5A0A075B6B5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-5A0A075B6B5 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-5A0A075B6B5 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-5A0A075B6B5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-5A0A075B6B5 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-5A0A075B6B5 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-5A0A075B6B5 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav6-5A0A075B6B5 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-5A0A075B6B5 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-5A0A075B6B5 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-5A0A075B6B5 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-5A0A075B6B5 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-5A0A075B6B5 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.55■□□□□ 0.08
Trav6-5A0A075B6B5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-5A0A075B6B5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-5A0A075B6B5 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-5A0A075B6B5 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.55■□□□□ 0.08
Trav6-5A0A075B6B5 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-5A0A075B6B5 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Trav6-5A0A075B6B5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-5A0A075B6B5 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-5A0A075B6B5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Trav6-5A0A075B6B5 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-5A0A075B6B5 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-5A0A075B6B5 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-5A0A075B6B5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-5A0A075B6B5 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-5A0A075B6B5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-5A0A075B6B5 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-5A0A075B6B5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-5A0A075B6B5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC15.54■□□□□ 0.08
Trav6-5A0A075B6B5 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC15.54■□□□□ 0.08
Trav6-5A0A075B6B5 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav6-5A0A075B6B5 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-5A0A075B6B5 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Trav6-5A0A075B6B5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.54■□□□□ 0.08
Trav6-5A0A075B6B5 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-5A0A075B6B5 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-5A0A075B6B5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav6-5A0A075B6B5 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-5A0A075B6B5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-5A0A075B6B5 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-5A0A075B6B5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-5A0A075B6B5 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-5A0A075B6B5 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav6-5A0A075B6B5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6-5A0A075B6B5 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6-5A0A075B6B5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trav6-5A0A075B6B5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6-5A0A075B6B5 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6-5A0A075B6B5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6-5A0A075B6B5 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Trav6-5A0A075B6B5 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6-5A0A075B6B5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Trav6-5A0A075B6B5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6-5A0A075B6B5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6-5A0A075B6B5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6-5A0A075B6B5 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-5A0A075B6B5 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav6-5A0A075B6B5 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-5A0A075B6B5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav6-5A0A075B6B5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-5A0A075B6B5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-5A0A075B6B5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-5A0A075B6B5 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-5A0A075B6B5 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-5A0A075B6B5 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-5A0A075B6B5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Trav6-5A0A075B6B5 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Trav6-5A0A075B6B5 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-5A0A075B6B5 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-5A0A075B6B5 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-5A0A075B6B5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-5A0A075B6B5 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC15.5■□□□□ 0.07
Trav6-5A0A075B6B5 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav6-5A0A075B6B5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-5A0A075B6B5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav6-5A0A075B6B5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-5A0A075B6B5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-5A0A075B6B5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-5A0A075B6B5 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-5A0A075B6B5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC15.5■□□□□ 0.07
Trav6-5A0A075B6B5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC15.5■□□□□ 0.07
Trav6-5A0A075B6B5 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-5A0A075B6B5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-5A0A075B6B5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav6-5A0A075B6B5 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav6-5A0A075B6B5 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-5A0A075B6B5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-5A0A075B6B5 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-5A0A075B6B5 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-5A0A075B6B5 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-5A0A075B6B5 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC15.49■□□□□ 0.07
Trav6-5A0A075B6B5 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC15.49■□□□□ 0.07
Trav6-5A0A075B6B5 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-5A0A075B6B5 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-5A0A075B6B5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-5A0A075B6B5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms