Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9d-1A0A075B699 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9d-1A0A075B699 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9d-1A0A075B699 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9d-1A0A075B699 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Trav9d-1A0A075B699 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9d-1A0A075B699 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav9d-1A0A075B699 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9d-1A0A075B699 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9d-1A0A075B699 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav9d-1A0A075B699 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9d-1A0A075B699 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav9d-1A0A075B699 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav9d-1A0A075B699 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav9d-1A0A075B699 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9d-1A0A075B699 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9d-1A0A075B699 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav9d-1A0A075B699 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav9d-1A0A075B699 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9d-1A0A075B699 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9d-1A0A075B699 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9d-1A0A075B699 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9d-1A0A075B699 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav9d-1A0A075B699 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.48■□□□□ 0.07
Trav9d-1A0A075B699 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9d-1A0A075B699 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9d-1A0A075B699 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9d-1A0A075B699 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trav9d-1A0A075B699 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.48■□□□□ 0.07
Trav9d-1A0A075B699 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9d-1A0A075B699 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav9d-1A0A075B699 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9d-1A0A075B699 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9d-1A0A075B699 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9d-1A0A075B699 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9d-1A0A075B699 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.48■□□□□ 0.07
Trav9d-1A0A075B699 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9d-1A0A075B699 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav9d-1A0A075B699 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9d-1A0A075B699 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trav9d-1A0A075B699 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9d-1A0A075B699 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9d-1A0A075B699 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav9d-1A0A075B699 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9d-1A0A075B699 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9d-1A0A075B699 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trav9d-1A0A075B699 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9d-1A0A075B699 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9d-1A0A075B699 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.47■□□□□ 0.07
Trav9d-1A0A075B699 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9d-1A0A075B699 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9d-1A0A075B699 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Trav9d-1A0A075B699 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Trav9d-1A0A075B699 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9d-1A0A075B699 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9d-1A0A075B699 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9d-1A0A075B699 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9d-1A0A075B699 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav9d-1A0A075B699 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav9d-1A0A075B699 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav9d-1A0A075B699 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.46■□□□□ 0.07
Trav9d-1A0A075B699 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trav9d-1A0A075B699 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav9d-1A0A075B699 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav9d-1A0A075B699 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav9d-1A0A075B699 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav9d-1A0A075B699 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9d-1A0A075B699 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9d-1A0A075B699 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav9d-1A0A075B699 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav9d-1A0A075B699 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9d-1A0A075B699 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9d-1A0A075B699 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.45■□□□□ 0.06
Trav9d-1A0A075B699 Gm10399-202ENSMUST00000202768 748 ntBASIC15.45■□□□□ 0.06
Trav9d-1A0A075B699 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9d-1A0A075B699 Gm10232-201ENSMUST00000089221 720 ntBASIC15.45■□□□□ 0.06
Trav9d-1A0A075B699 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9d-1A0A075B699 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9d-1A0A075B699 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9d-1A0A075B699 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9d-1A0A075B699 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Trav9d-1A0A075B699 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Trav9d-1A0A075B699 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9d-1A0A075B699 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9d-1A0A075B699 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9d-1A0A075B699 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9d-1A0A075B699 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9d-1A0A075B699 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9d-1A0A075B699 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav9d-1A0A075B699 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9d-1A0A075B699 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav9d-1A0A075B699 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9d-1A0A075B699 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9d-1A0A075B699 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9d-1A0A075B699 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9d-1A0A075B699 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9d-1A0A075B699 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Trav9d-1A0A075B699 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.43■□□□□ 0.06
Trav9d-1A0A075B699 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.43■□□□□ 0.06
Trav9d-1A0A075B699 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms