Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdv1A0A075B657 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdv1A0A075B657 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trdv1A0A075B657 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trdv1A0A075B657 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trdv1A0A075B657 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.31■□□□□ 0.04
Trdv1A0A075B657 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdv1A0A075B657 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdv1A0A075B657 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trdv1A0A075B657 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trdv1A0A075B657 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdv1A0A075B657 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdv1A0A075B657 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdv1A0A075B657 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdv1A0A075B657 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdv1A0A075B657 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdv1A0A075B657 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.3■□□□□ 0.04
Trdv1A0A075B657 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trdv1A0A075B657 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trdv1A0A075B657 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC15.3■□□□□ 0.04
Trdv1A0A075B657 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trdv1A0A075B657 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.3■□□□□ 0.04
Trdv1A0A075B657 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdv1A0A075B657 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdv1A0A075B657 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdv1A0A075B657 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.29■□□□□ 0.04
Trdv1A0A075B657 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.29■□□□□ 0.04
Trdv1A0A075B657 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trdv1A0A075B657 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trdv1A0A075B657 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trdv1A0A075B657 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trdv1A0A075B657 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.29■□□□□ 0.04
Trdv1A0A075B657 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.29■□□□□ 0.04
Trdv1A0A075B657 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trdv1A0A075B657 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trdv1A0A075B657 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trdv1A0A075B657 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.29■□□□□ 0.04
Trdv1A0A075B657 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trdv1A0A075B657 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trdv1A0A075B657 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trdv1A0A075B657 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdv1A0A075B657 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trdv1A0A075B657 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trdv1A0A075B657 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trdv1A0A075B657 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trdv1A0A075B657 Gm11175-201ENSMUST00000116172 543 ntBASIC15.28■□□□□ 0.04
Trdv1A0A075B657 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.28■□□□□ 0.04
Trdv1A0A075B657 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdv1A0A075B657 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdv1A0A075B657 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trdv1A0A075B657 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdv1A0A075B657 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdv1A0A075B657 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdv1A0A075B657 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trdv1A0A075B657 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trdv1A0A075B657 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trdv1A0A075B657 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trdv1A0A075B657 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trdv1A0A075B657 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trdv1A0A075B657 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trdv1A0A075B657 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trdv1A0A075B657 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Trdv1A0A075B657 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trdv1A0A075B657 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC15.27■□□□□ 0.04
Trdv1A0A075B657 Gm12366-201ENSMUST00000121722 873 ntBASIC15.27■□□□□ 0.04
Trdv1A0A075B657 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC15.27■□□□□ 0.04
Trdv1A0A075B657 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC15.27■□□□□ 0.04
Trdv1A0A075B657 Gm5786-201ENSMUST00000085368 882 ntBASIC15.27■□□□□ 0.04
Trdv1A0A075B657 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trdv1A0A075B657 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trdv1A0A075B657 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.27■□□□□ 0.03
Trdv1A0A075B657 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trdv1A0A075B657 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trdv1A0A075B657 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trdv1A0A075B657 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trdv1A0A075B657 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdv1A0A075B657 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trdv1A0A075B657 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trdv1A0A075B657 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdv1A0A075B657 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdv1A0A075B657 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdv1A0A075B657 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trdv1A0A075B657 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdv1A0A075B657 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdv1A0A075B657 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.26■□□□□ 0.03
Trdv1A0A075B657 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdv1A0A075B657 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdv1A0A075B657 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdv1A0A075B657 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Trdv1A0A075B657 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdv1A0A075B657 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdv1A0A075B657 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trdv1A0A075B657 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trdv1A0A075B657 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.25■□□□□ 0.03
Trdv1A0A075B657 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdv1A0A075B657 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdv1A0A075B657 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdv1A0A075B657 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdv1A0A075B657 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdv1A0A075B657 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms