Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav5-4A0A075B652 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.7■□□□□ 0.26
Trav5-4A0A075B652 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.7■□□□□ 0.26
Trav5-4A0A075B652 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav5-4A0A075B652 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.7■□□□□ 0.26
Trav5-4A0A075B652 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav5-4A0A075B652 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trav5-4A0A075B652 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav5-4A0A075B652 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav5-4A0A075B652 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trav5-4A0A075B652 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav5-4A0A075B652 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav5-4A0A075B652 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav5-4A0A075B652 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav5-4A0A075B652 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav5-4A0A075B652 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav5-4A0A075B652 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav5-4A0A075B652 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav5-4A0A075B652 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav5-4A0A075B652 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav5-4A0A075B652 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trav5-4A0A075B652 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav5-4A0A075B652 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.69■□□□□ 0.26
Trav5-4A0A075B652 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav5-4A0A075B652 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trav5-4A0A075B652 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav5-4A0A075B652 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav5-4A0A075B652 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5-4A0A075B652 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5-4A0A075B652 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5-4A0A075B652 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5-4A0A075B652 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.68■□□□□ 0.26
Trav5-4A0A075B652 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.68■□□□□ 0.26
Trav5-4A0A075B652 Gm40881-201ENSMUST00000223397 166 ntBASIC16.68■□□□□ 0.26
Trav5-4A0A075B652 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5-4A0A075B652 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5-4A0A075B652 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5-4A0A075B652 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5-4A0A075B652 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trav5-4A0A075B652 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5-4A0A075B652 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav5-4A0A075B652 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.67■□□□□ 0.26
Trav5-4A0A075B652 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav5-4A0A075B652 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav5-4A0A075B652 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav5-4A0A075B652 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav5-4A0A075B652 Gm15820-201ENSMUST00000201566 728 ntBASIC16.67■□□□□ 0.26
Trav5-4A0A075B652 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav5-4A0A075B652 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav5-4A0A075B652 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trav5-4A0A075B652 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav5-4A0A075B652 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav5-4A0A075B652 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav5-4A0A075B652 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav5-4A0A075B652 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav5-4A0A075B652 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav5-4A0A075B652 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav5-4A0A075B652 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav5-4A0A075B652 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trav5-4A0A075B652 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav5-4A0A075B652 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trav5-4A0A075B652 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.66■□□□□ 0.26
Trav5-4A0A075B652 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav5-4A0A075B652 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav5-4A0A075B652 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav5-4A0A075B652 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav5-4A0A075B652 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav5-4A0A075B652 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav5-4A0A075B652 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trav5-4A0A075B652 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav5-4A0A075B652 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav5-4A0A075B652 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trav5-4A0A075B652 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav5-4A0A075B652 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav5-4A0A075B652 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trav5-4A0A075B652 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav5-4A0A075B652 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Trav5-4A0A075B652 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trav5-4A0A075B652 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav5-4A0A075B652 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Trav5-4A0A075B652 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trav5-4A0A075B652 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav5-4A0A075B652 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trav5-4A0A075B652 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav5-4A0A075B652 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav5-4A0A075B652 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav5-4A0A075B652 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav5-4A0A075B652 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav5-4A0A075B652 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Trav5-4A0A075B652 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav5-4A0A075B652 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav5-4A0A075B652 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav5-4A0A075B652 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.63■□□□□ 0.25
Trav5-4A0A075B652 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trav5-4A0A075B652 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trav5-4A0A075B652 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.63■□□□□ 0.25
Trav5-4A0A075B652 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav5-4A0A075B652 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trav5-4A0A075B652 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav5-4A0A075B652 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms