Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav4-4-dv10A0A075B651 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav4-4-dv10A0A075B651 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav4-4-dv10A0A075B651 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav4-4-dv10A0A075B651 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav4-4-dv10A0A075B651 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Trav4-4-dv10A0A075B651 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav4-4-dv10A0A075B651 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Trav4-4-dv10A0A075B651 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4-4-dv10A0A075B651 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trav4-4-dv10A0A075B651 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4-4-dv10A0A075B651 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav4-4-dv10A0A075B651 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4-4-dv10A0A075B651 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4-4-dv10A0A075B651 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav4-4-dv10A0A075B651 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4-4-dv10A0A075B651 Iqck-206ENSMUST00000208658 2891 ntBASIC15.67■□□□□ 0.1
Trav4-4-dv10A0A075B651 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.67■□□□□ 0.1
Trav4-4-dv10A0A075B651 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav4-4-dv10A0A075B651 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav4-4-dv10A0A075B651 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav4-4-dv10A0A075B651 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav4-4-dv10A0A075B651 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav4-4-dv10A0A075B651 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav4-4-dv10A0A075B651 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav4-4-dv10A0A075B651 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav4-4-dv10A0A075B651 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.66■□□□□ 0.1
Trav4-4-dv10A0A075B651 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav4-4-dv10A0A075B651 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav4-4-dv10A0A075B651 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-4-dv10A0A075B651 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-4-dv10A0A075B651 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav4-4-dv10A0A075B651 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-4-dv10A0A075B651 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-4-dv10A0A075B651 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-4-dv10A0A075B651 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-4-dv10A0A075B651 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-4-dv10A0A075B651 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-4-dv10A0A075B651 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-4-dv10A0A075B651 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav4-4-dv10A0A075B651 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-4-dv10A0A075B651 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-4-dv10A0A075B651 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.65■□□□□ 0.1
Trav4-4-dv10A0A075B651 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-4-dv10A0A075B651 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-4-dv10A0A075B651 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Trav4-4-dv10A0A075B651 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.64■□□□□ 0.09
Trav4-4-dv10A0A075B651 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav4-4-dv10A0A075B651 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav4-4-dv10A0A075B651 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav4-4-dv10A0A075B651 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav4-4-dv10A0A075B651 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav4-4-dv10A0A075B651 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.64■□□□□ 0.09
Trav4-4-dv10A0A075B651 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav4-4-dv10A0A075B651 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav4-4-dv10A0A075B651 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trav4-4-dv10A0A075B651 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav4-4-dv10A0A075B651 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav4-4-dv10A0A075B651 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4-4-dv10A0A075B651 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trav4-4-dv10A0A075B651 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4-4-dv10A0A075B651 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav4-4-dv10A0A075B651 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.63■□□□□ 0.09
Trav4-4-dv10A0A075B651 Mir6538-201ENSMUST00000183713 110 ntBASIC15.63■□□□□ 0.09
Trav4-4-dv10A0A075B651 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.63■□□□□ 0.09
Trav4-4-dv10A0A075B651 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Trav4-4-dv10A0A075B651 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4-4-dv10A0A075B651 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4-4-dv10A0A075B651 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav4-4-dv10A0A075B651 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav4-4-dv10A0A075B651 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4-4-dv10A0A075B651 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4-4-dv10A0A075B651 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4-4-dv10A0A075B651 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4-4-dv10A0A075B651 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trav4-4-dv10A0A075B651 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav4-4-dv10A0A075B651 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4-4-dv10A0A075B651 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4-4-dv10A0A075B651 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4-4-dv10A0A075B651 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav4-4-dv10A0A075B651 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.62■□□□□ 0.09
Trav4-4-dv10A0A075B651 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.62■□□□□ 0.09
Trav4-4-dv10A0A075B651 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4-4-dv10A0A075B651 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4-4-dv10A0A075B651 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4-4-dv10A0A075B651 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Trav4-4-dv10A0A075B651 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4-4-dv10A0A075B651 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4-4-dv10A0A075B651 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4-4-dv10A0A075B651 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav4-4-dv10A0A075B651 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4-4-dv10A0A075B651 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4-4-dv10A0A075B651 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4-4-dv10A0A075B651 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4-4-dv10A0A075B651 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4-4-dv10A0A075B651 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.61■□□□□ 0.09
Trav4-4-dv10A0A075B651 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4-4-dv10A0A075B651 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4-4-dv10A0A075B651 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4-4-dv10A0A075B651 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms