Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13-1A0A075B644 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13-1A0A075B644 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13-1A0A075B644 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13-1A0A075B644 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13-1A0A075B644 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13-1A0A075B644 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13-1A0A075B644 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13-1A0A075B644 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav13-1A0A075B644 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13-1A0A075B644 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13-1A0A075B644 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Trav13-1A0A075B644 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav13-1A0A075B644 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Trav13-1A0A075B644 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13-1A0A075B644 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13-1A0A075B644 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13-1A0A075B644 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13-1A0A075B644 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13-1A0A075B644 Gm45417-201ENSMUST00000209533 758 ntBASIC14.22□□□□□ -0.13
Trav13-1A0A075B644 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13-1A0A075B644 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13-1A0A075B644 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trav13-1A0A075B644 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav13-1A0A075B644 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13-1A0A075B644 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13-1A0A075B644 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav13-1A0A075B644 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13-1A0A075B644 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13-1A0A075B644 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.21□□□□□ -0.13
Trav13-1A0A075B644 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13-1A0A075B644 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13-1A0A075B644 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13-1A0A075B644 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13-1A0A075B644 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13-1A0A075B644 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13-1A0A075B644 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13-1A0A075B644 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13-1A0A075B644 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13-1A0A075B644 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13-1A0A075B644 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13-1A0A075B644 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13-1A0A075B644 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Trav13-1A0A075B644 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav13-1A0A075B644 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav13-1A0A075B644 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13-1A0A075B644 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13-1A0A075B644 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13-1A0A075B644 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13-1A0A075B644 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav13-1A0A075B644 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13-1A0A075B644 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13-1A0A075B644 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13-1A0A075B644 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav13-1A0A075B644 Notumos-201ENSMUST00000151998 2659 ntBASIC14.18□□□□□ -0.14
Trav13-1A0A075B644 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13-1A0A075B644 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav13-1A0A075B644 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13-1A0A075B644 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13-1A0A075B644 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav13-1A0A075B644 Gm37415-201ENSMUST00000192265 2054 ntBASIC14.18□□□□□ -0.14
Trav13-1A0A075B644 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13-1A0A075B644 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13-1A0A075B644 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.18□□□□□ -0.14
Trav13-1A0A075B644 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13-1A0A075B644 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.18□□□□□ -0.14
Trav13-1A0A075B644 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13-1A0A075B644 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav13-1A0A075B644 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13-1A0A075B644 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav13-1A0A075B644 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13-1A0A075B644 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13-1A0A075B644 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.18□□□□□ -0.14
Trav13-1A0A075B644 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Trav13-1A0A075B644 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13-1A0A075B644 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13-1A0A075B644 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13-1A0A075B644 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav13-1A0A075B644 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13-1A0A075B644 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13-1A0A075B644 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13-1A0A075B644 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13-1A0A075B644 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav13-1A0A075B644 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13-1A0A075B644 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13-1A0A075B644 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13-1A0A075B644 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav13-1A0A075B644 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC14.17□□□□□ -0.14
Trav13-1A0A075B644 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13-1A0A075B644 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav13-1A0A075B644 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav13-1A0A075B644 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13-1A0A075B644 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13-1A0A075B644 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav13-1A0A075B644 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13-1A0A075B644 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13-1A0A075B644 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.16□□□□□ -0.14
Trav13-1A0A075B644 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav13-1A0A075B644 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.16□□□□□ -0.14
Trav13-1A0A075B644 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms