Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav4d-3A0A075B625 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4d-3A0A075B625 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trav4d-3A0A075B625 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4d-3A0A075B625 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4d-3A0A075B625 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4d-3A0A075B625 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4d-3A0A075B625 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4d-3A0A075B625 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Trav4d-3A0A075B625 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4d-3A0A075B625 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav4d-3A0A075B625 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4d-3A0A075B625 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4d-3A0A075B625 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Trav4d-3A0A075B625 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav4d-3A0A075B625 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav4d-3A0A075B625 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Trav4d-3A0A075B625 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4d-3A0A075B625 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4d-3A0A075B625 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4d-3A0A075B625 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4d-3A0A075B625 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4d-3A0A075B625 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav4d-3A0A075B625 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4d-3A0A075B625 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4d-3A0A075B625 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4d-3A0A075B625 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4d-3A0A075B625 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4d-3A0A075B625 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4d-3A0A075B625 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4d-3A0A075B625 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4d-3A0A075B625 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4d-3A0A075B625 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4d-3A0A075B625 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav4d-3A0A075B625 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4d-3A0A075B625 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav4d-3A0A075B625 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4d-3A0A075B625 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav4d-3A0A075B625 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4d-3A0A075B625 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4d-3A0A075B625 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4d-3A0A075B625 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4d-3A0A075B625 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4d-3A0A075B625 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav4d-3A0A075B625 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC13.66□□□□□ -0.22
Trav4d-3A0A075B625 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4d-3A0A075B625 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4d-3A0A075B625 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4d-3A0A075B625 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4d-3A0A075B625 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4d-3A0A075B625 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4d-3A0A075B625 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4d-3A0A075B625 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4d-3A0A075B625 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4d-3A0A075B625 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4d-3A0A075B625 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4d-3A0A075B625 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4d-3A0A075B625 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4d-3A0A075B625 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4d-3A0A075B625 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4d-3A0A075B625 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav4d-3A0A075B625 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4d-3A0A075B625 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4d-3A0A075B625 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
Trav4d-3A0A075B625 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav4d-3A0A075B625 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav4d-3A0A075B625 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4d-3A0A075B625 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4d-3A0A075B625 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4d-3A0A075B625 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav4d-3A0A075B625 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC13.64□□□□□ -0.23
Trav4d-3A0A075B625 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4d-3A0A075B625 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4d-3A0A075B625 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4d-3A0A075B625 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trav4d-3A0A075B625 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4d-3A0A075B625 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4d-3A0A075B625 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4d-3A0A075B625 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4d-3A0A075B625 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav4d-3A0A075B625 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav4d-3A0A075B625 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4d-3A0A075B625 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4d-3A0A075B625 AC117769.4-201ENSMUST00000225679 685 ntBASIC13.63□□□□□ -0.23
Trav4d-3A0A075B625 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4d-3A0A075B625 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4d-3A0A075B625 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4d-3A0A075B625 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4d-3A0A075B625 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4d-3A0A075B625 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4d-3A0A075B625 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4d-3A0A075B625 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav4d-3A0A075B625 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4d-3A0A075B625 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4d-3A0A075B625 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav4d-3A0A075B625 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4d-3A0A075B625 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trav4d-3A0A075B625 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav4d-3A0A075B625 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4d-3A0A075B625 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms