Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Gm45118-201ENSMUST00000208928 825 ntBASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Gm39288-201ENSMUST00000210554 446 ntBASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 AC122367.1-201ENSMUST00000221978 1709 ntBASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Snord23-201ENSMUST00000116828 109 ntBASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Gm17391-201ENSMUST00000171036 126 ntBASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Gm37597-201ENSMUST00000191853 382 ntBASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Gm40414-201ENSMUST00000197608 481 ntBASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Gm5865-201ENSMUST00000198713 637 ntBASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.38□□□□□ -0.59
Cpne8Q9DC53 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.38□□□□□ -0.59
Cpne8Q9DC53 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.38□□□□□ -0.59
Cpne8Q9DC53 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Gm25125-201ENSMUST00000083340 136 ntBASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Snora73b-201ENSMUST00000083419 205 ntBASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpne8Q9DC53 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms