Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Pcdhga6Q91XY2 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga6Q91XY2 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga6Q91XY2 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga6Q91XY2 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga6Q91XY2 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga6Q91XY2 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.04□□□□□ -0.64
Pcdhga6Q91XY2 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga6Q91XY2 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga6Q91XY2 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdhga6Q91XY2 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Gm23769-201ENSMUST00000104441 121 ntBASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Gm11475-201ENSMUST00000118482 476 ntBASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Gm15549-201ENSMUST00000121595 622 ntBASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Gm6612-201ENSMUST00000170777 395 ntBASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Gm26976-201ENSMUST00000182929 908 ntBASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Gm9192-201ENSMUST00000183221 985 ntBASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Gm5267-201ENSMUST00000191574 1045 ntBASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Gm17825-201ENSMUST00000206836 794 ntBASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Gm9487-201ENSMUST00000216600 472 ntBASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 AC164099.1-201ENSMUST00000227780 333 ntBASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 AC107763.1-201ENSMUST00000226082 1365 ntBASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdhga6Q91XY2 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdhga6Q91XY2 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
Pcdhga6Q91XY2 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdhga6Q91XY2 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdhga6Q91XY2 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdhga6Q91XY2 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdhga6Q91XY2 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Pcdhga6Q91XY2 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdhga6Q91XY2 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Pcdhga6Q91XY2 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Pcdhga6Q91XY2 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdhga6Q91XY2 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdhga6Q91XY2 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdhga6Q91XY2 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Pcdhga6Q91XY2 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdhga6Q91XY2 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdhga6Q91XY2 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Smok4a-201ENSMUST00000074512 1455 ntBASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Gm12389-201ENSMUST00000117696 418 ntBASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Gm14497-201ENSMUST00000119537 580 ntBASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms