Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Gm45161-201ENSMUST00000207316 2263 ntBASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Gm44103-201ENSMUST00000204364 3662 ntBASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Gm10463-202ENSMUST00000195772 2889 ntBASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Gm43916-201ENSMUST00000205062 967 ntBASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Gm31941-201ENSMUST00000209689 350 ntBASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28aQ8CEI3 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Ccdc28aQ8CEI3 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Ccdc28aQ8CEI3 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ccdc28aQ8CEI3 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ccdc28aQ8CEI3 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Ccdc28aQ8CEI3 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ccdc28aQ8CEI3 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.52□□□□□ -0.56
Ccdc28aQ8CEI3 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Gm14058-201ENSMUST00000116082 735 ntBASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Gm14208-201ENSMUST00000119645 678 ntBASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Gm4917-201ENSMUST00000121452 650 ntBASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Gm37981-201ENSMUST00000194280 535 ntBASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 AC122382.1-201ENSMUST00000225869 2371 ntBASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28aQ8CEI3 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms