Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.08□□□□□ -0.48
Trim9Q8C7M3 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Gm12274-201ENSMUST00000120062 385 ntBASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Gm8531-201ENSMUST00000188319 893 ntBASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Gm43671-201ENSMUST00000200422 433 ntBASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 AC108416.1-201ENSMUST00000228755 1558 ntBASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim9Q8C7M3 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Gm5944-201ENSMUST00000118182 1001 ntBASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Gm25226-201ENSMUST00000158198 123 ntBASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Gm26134-201ENSMUST00000178484 110 ntBASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Gm5523-201ENSMUST00000180415 997 ntBASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Gm7047-201ENSMUST00000196224 1063 ntBASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 184.8 ms