Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gm8956-201ENSMUST00000203939 825 ntBASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 CT485787.1-201ENSMUST00000225617 968 ntBASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 AC109214.1-201ENSMUST00000219520 1372 ntBASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Gm7742-201ENSMUST00000167648 1527 ntBASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Gm7732-201ENSMUST00000170486 1527 ntBASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Gm7740-201ENSMUST00000186171 1527 ntBASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Gm7736-201ENSMUST00000096981 1527 ntBASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Gm43274-201ENSMUST00000202545 5000 ntBASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Gm42741-201ENSMUST00000201340 2278 ntBASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Tsen54Q8C2A2 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Gm23949-201ENSMUST00000104027 127 ntBASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Gm12164-201ENSMUST00000121695 551 ntBASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Gm27341-201ENSMUST00000183570 106 ntBASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Mir7677-201ENSMUST00000184226 67 ntBASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Gm37122-201ENSMUST00000195313 1567 ntBASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Gm43184-201ENSMUST00000197247 542 ntBASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Gm44445-201ENSMUST00000204075 2683 ntBASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Gm2553-201ENSMUST00000215986 605 ntBASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 AC171277.1-201ENSMUST00000216902 1441 ntBASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Tm4sf1-201ENSMUST00000029376 1436 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Tsen54Q8C2A2 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Tsen54Q8C2A2 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Tsen54Q8C2A2 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Tsen54Q8C2A2 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Tsen54Q8C2A2 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Tsen54Q8C2A2 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Tsen54Q8C2A2 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Tsen54Q8C2A2 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC9.17□□□□□ -0.94
Tsen54Q8C2A2 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Tsen54Q8C2A2 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Tsen54Q8C2A2 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Tsen54Q8C2A2 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms