Protein–RNA interactions for Protein: Q8BVL3

Snx17, Sorting nexin-17, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx17Q8BVL3 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snx17Q8BVL3 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Snx17Q8BVL3 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snx17Q8BVL3 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Snx17Q8BVL3 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.24□□□□□ -0.45
Snx17Q8BVL3 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 AC122273.1-201ENSMUST00000213634 2327 ntBASIC12.23□□□□□ -0.45
Snx17Q8BVL3 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.23□□□□□ -0.45
Snx17Q8BVL3 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Gm11540-201ENSMUST00000117457 780 ntBASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Gm14699-201ENSMUST00000122340 228 ntBASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Gm9353-201ENSMUST00000200472 604 ntBASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Gm18256-201ENSMUST00000209087 907 ntBASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Gm5040-201ENSMUST00000218609 800 ntBASIC12.23□□□□□ -0.45
Snx17Q8BVL3 AC133496.1-201ENSMUST00000223891 743 ntBASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Gm9701-201ENSMUST00000077976 427 ntBASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Snx17Q8BVL3 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 AC151836.1-201ENSMUST00000228730 1637 ntBASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Snord17-201ENSMUST00000104526 238 ntBASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Gm14176-201ENSMUST00000121302 477 ntBASIC12.22□□□□□ -0.45
Snx17Q8BVL3 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Gm26943-201ENSMUST00000182295 957 ntBASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC12.22□□□□□ -0.45
Snx17Q8BVL3 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Gm3527-201ENSMUST00000198905 460 ntBASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Gm3926-201ENSMUST00000223378 1123 ntBASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Mir341-201ENSMUST00000093593 96 ntBASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Gm6304-201ENSMUST00000096579 447 ntBASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Gm4778-201ENSMUST00000098878 1098 ntBASIC12.22□□□□□ -0.45
Snx17Q8BVL3 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms