Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Nuf2-203ENSMUST00000192248 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Hsd17b3-204ENSMUST00000222783 1184 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Gm26440-201ENSMUST00000082591 129 ntBASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Abcc9-205ENSMUST00000204870 1458 ntTSL 2 BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 AC124561.1-202ENSMUST00000228652 1929 ntBASIC10.09□□□□□ -0.79
Spg11Q3UHA3 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Gm33180-201ENSMUST00000217109 1480 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Myl7-201ENSMUST00000102921 590 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Snora68-201ENSMUST00000104375 131 ntBASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Gm6286-201ENSMUST00000145247 762 ntBASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Gm16104-201ENSMUST00000156260 401 ntTSL 2 BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Gm16470-201ENSMUST00000182456 998 ntBASIC10.08□□□□□ -0.8
Spg11Q3UHA3 1700102F20Rik-201ENSMUST00000203859 670 ntBASIC10.08□□□□□ -0.8
Spg11Q3UHA3 AC118476.4-201ENSMUST00000215385 790 ntTSL 5 BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Gm44907-201ENSMUST00000207423 1633 ntBASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Gm13792-201ENSMUST00000121350 423 ntBASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Gm8817-201ENSMUST00000126769 693 ntTSL 2 BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 4930401O10Rik-201ENSMUST00000128489 787 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 4930538E20Rik-201ENSMUST00000131383 546 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Gm2716-201ENSMUST00000212350 643 ntBASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Gm8557-201ENSMUST00000220777 475 ntBASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Krtap9-1-201ENSMUST00000093936 1044 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 AC154186.1-201ENSMUST00000227711 1597 ntBASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Gm19114-201ENSMUST00000193972 1357 ntBASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Spg11Q3UHA3 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Gm38004-201ENSMUST00000192972 357 ntBASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Gm18857-201ENSMUST00000210421 901 ntBASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Gm18623-201ENSMUST00000219860 953 ntBASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Gm6457-201ENSMUST00000066378 815 ntBASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Ctse-201ENSMUST00000073350 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms