Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Gm13461-201ENSMUST00000120980 662 ntBASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Gm8199-201ENSMUST00000121323 823 ntBASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.63□□□□□ -0.55
Trim43aQ3TL54 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Gm21778-201ENSMUST00000178779 471 ntBASIC11.63□□□□□ -0.55
Trim43aQ3TL54 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Gm7985-201ENSMUST00000183329 981 ntBASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Gm29067-201ENSMUST00000190821 470 ntBASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Gm12570-201ENSMUST00000122047 1030 ntBASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.62□□□□□ -0.55
Trim43aQ3TL54 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim43aQ3TL54 Gm6714-201ENSMUST00000218677 2330 ntBASIC11.61□□□□□ -0.55
Trim43aQ3TL54 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 AC144938.1-201ENSMUST00000223994 2167 ntBASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.61□□□□□ -0.55
Trim43aQ3TL54 Gm14058-201ENSMUST00000116082 735 ntBASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms