Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Gm43152-201ENSMUST00000202495 1638 ntBASIC9.37□□□□□ -0.91
Smn1P97801 Gm45165-201ENSMUST00000207763 1631 ntBASIC9.37□□□□□ -0.91
Smn1P97801 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Smn1P97801 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Smn1P97801 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC9.37□□□□□ -0.91
Smn1P97801 Gm37264-201ENSMUST00000194916 2192 ntBASIC9.37□□□□□ -0.91
Smn1P97801 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC9.37□□□□□ -0.91
Smn1P97801 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Gm9915-201ENSMUST00000066196 1383 ntBASIC9.37□□□□□ -0.91
Smn1P97801 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
Smn1P97801 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Gm6768-201ENSMUST00000022467 1878 ntBASIC9.36□□□□□ -0.91
Smn1P97801 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC9.36□□□□□ -0.91
Smn1P97801 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Smn1P97801 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Smn1P97801 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Smn1P97801 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Smn1P97801 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Gm12218-201ENSMUST00000117666 399 ntBASIC9.36□□□□□ -0.91
Smn1P97801 Gm12501-201ENSMUST00000119163 529 ntBASIC9.36□□□□□ -0.91
Smn1P97801 Gm15566-201ENSMUST00000121130 590 ntBASIC9.36□□□□□ -0.91
Smn1P97801 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC9.36□□□□□ -0.91
Smn1P97801 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC9.36□□□□□ -0.91
Smn1P97801 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC9.36□□□□□ -0.91
Smn1P97801 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC9.36□□□□□ -0.91
Smn1P97801 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC9.36□□□□□ -0.91
Smn1P97801 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC9.36□□□□□ -0.91
Smn1P97801 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC9.36□□□□□ -0.91
Smn1P97801 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Mir219a-1-201ENSMUST00000083621 110 ntBASIC9.36□□□□□ -0.91
Smn1P97801 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Smn1P97801 Gm40377-201ENSMUST00000204604 2015 ntBASIC9.36□□□□□ -0.91
Smn1P97801 Gm5822-201ENSMUST00000161562 1378 ntBASIC9.36□□□□□ -0.91
Smn1P97801 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
Smn1P97801 Gm7742-201ENSMUST00000167648 1527 ntBASIC9.36□□□□□ -0.91
Smn1P97801 Gm7732-201ENSMUST00000170486 1527 ntBASIC9.36□□□□□ -0.91
Smn1P97801 Gm7740-201ENSMUST00000186171 1527 ntBASIC9.36□□□□□ -0.91
Smn1P97801 Gm7736-201ENSMUST00000096981 1527 ntBASIC9.36□□□□□ -0.91
Smn1P97801 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smn1P97801 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Smn1P97801 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Smn1P97801 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Smn1P97801 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC9.35□□□□□ -0.91
Smn1P97801 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Smn1P97801 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Smn1P97801 Gm14127-201ENSMUST00000117906 678 ntBASIC9.35□□□□□ -0.91
Smn1P97801 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC9.35□□□□□ -0.91
Smn1P97801 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC9.35□□□□□ -0.91
Smn1P97801 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms