Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm10580-201ENSMUST00000097985 396 ntBASIC8.87□□□□□ -0.99
Lmo4P61969 Gm10582-201ENSMUST00000097987 396 ntBASIC8.87□□□□□ -0.99
Lmo4P61969 Gm10583-201ENSMUST00000097988 396 ntBASIC8.87□□□□□ -0.99
Lmo4P61969 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Lmo4P61969 AC127597.1-201ENSMUST00000225697 5711 ntBASIC8.87□□□□□ -0.99
Lmo4P61969 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Lmo4P61969 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Lmo4P61969 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Lmo4P61969 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 AC151836.1-201ENSMUST00000228730 1637 ntBASIC8.87□□□□□ -0.99
Lmo4P61969 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Lmo4P61969 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC8.87□□□□□ -0.99
Lmo4P61969 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Lmo4P61969 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Lmo4P61969 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Lmo4P61969 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Gm38312-201ENSMUST00000195426 1746 ntBASIC8.86□□□□□ -0.99
Lmo4P61969 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC8.86□□□□□ -0.99
Lmo4P61969 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Lmo4P61969 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC8.86□□□□□ -0.99
Lmo4P61969 Gm37160-201ENSMUST00000193081 1689 ntBASIC8.86□□□□□ -0.99
Lmo4P61969 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC8.86□□□□□ -0.99
Lmo4P61969 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Gm11919-201ENSMUST00000117609 721 ntBASIC8.86□□□□□ -0.99
Lmo4P61969 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Gm16441-201ENSMUST00000138176 924 ntBASIC8.86□□□□□ -0.99
Lmo4P61969 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Lmo4P61969 Gm13827-201ENSMUST00000148801 372 ntBASIC8.86□□□□□ -0.99
Lmo4P61969 Gm6038-201ENSMUST00000154310 948 ntBASIC8.86□□□□□ -0.99
Lmo4P61969 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Lmo4P61969 Gm25872-201ENSMUST00000177784 100 ntBASIC8.86□□□□□ -0.99
Lmo4P61969 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC8.86□□□□□ -0.99
Lmo4P61969 Gm28671-201ENSMUST00000187036 692 ntBASIC8.86□□□□□ -0.99
Lmo4P61969 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC8.86□□□□□ -0.99
Lmo4P61969 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC8.86□□□□□ -0.99
Lmo4P61969 AC156790.2-201ENSMUST00000227115 568 ntBASIC8.86□□□□□ -0.99
Lmo4P61969 AC164099.1-201ENSMUST00000227780 333 ntBASIC8.86□□□□□ -0.99
Lmo4P61969 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Lmo4P61969 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Lmo4P61969 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Lmo4P61969 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Gm37969-201ENSMUST00000195777 3409 ntBASIC8.86□□□□□ -0.99
Lmo4P61969 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Lmo4P61969 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC8.85□□□□□ -0.99
Lmo4P61969 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms