Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.19□□□□□ -0.46
Tpm1P58771 Gm27320-201ENSMUST00000184892 109 ntBASIC12.19□□□□□ -0.46
Tpm1P58771 Gm27441-201ENSMUST00000185000 105 ntBASIC12.19□□□□□ -0.46
Tpm1P58771 Gm29499-201ENSMUST00000189151 486 ntBASIC12.19□□□□□ -0.46
Tpm1P58771 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.19□□□□□ -0.46
Tpm1P58771 Gm28329-201ENSMUST00000191208 689 ntBASIC12.19□□□□□ -0.46
Tpm1P58771 Gm29171-201ENSMUST00000191397 486 ntBASIC12.19□□□□□ -0.46
Tpm1P58771 Gm3961-201ENSMUST00000204425 994 ntBASIC12.19□□□□□ -0.46
Tpm1P58771 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.19□□□□□ -0.46
Tpm1P58771 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.19□□□□□ -0.46
Tpm1P58771 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Tpm1P58771 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC12.19□□□□□ -0.46
Tpm1P58771 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Tpm1P58771 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Gm43972-201ENSMUST00000181398 1467 ntBASIC12.19□□□□□ -0.46
Tpm1P58771 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Tpm1P58771 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC12.19□□□□□ -0.46
Tpm1P58771 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Tpm1P58771 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC12.19□□□□□ -0.46
Tpm1P58771 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tpm1P58771 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tpm1P58771 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tpm1P58771 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Tpm1P58771 AC108416.1-201ENSMUST00000228755 1558 ntBASIC12.18□□□□□ -0.46
Tpm1P58771 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tpm1P58771 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC12.18□□□□□ -0.46
Tpm1P58771 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tpm1P58771 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.18□□□□□ -0.46
Tpm1P58771 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.18□□□□□ -0.46
Tpm1P58771 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tpm1P58771 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.18□□□□□ -0.46
Tpm1P58771 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tpm1P58771 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tpm1P58771 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tpm1P58771 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tpm1P58771 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tpm1P58771 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tpm1P58771 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.18□□□□□ -0.46
Tpm1P58771 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tpm1P58771 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC12.18□□□□□ -0.46
Tpm1P58771 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tpm1P58771 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.18□□□□□ -0.46
Tpm1P58771 Gm12380-201ENSMUST00000119012 544 ntBASIC12.18□□□□□ -0.46
Tpm1P58771 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tpm1P58771 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Tpm1P58771 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.18□□□□□ -0.46
Tpm1P58771 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC12.18□□□□□ -0.46
Tpm1P58771 Gm25125-201ENSMUST00000083340 136 ntBASIC12.18□□□□□ -0.46
Tpm1P58771 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC12.18□□□□□ -0.46
Tpm1P58771 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Tpm1P58771 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tpm1P58771 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tpm1P58771 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tpm1P58771 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC12.18□□□□□ -0.46
Tpm1P58771 Gm37806-201ENSMUST00000194524 6387 ntBASIC12.18□□□□□ -0.46
Tpm1P58771 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tpm1P58771 AC122382.1-201ENSMUST00000225869 2371 ntBASIC12.18□□□□□ -0.46
Tpm1P58771 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tpm1P58771 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Tpm1P58771 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Tpm1P58771 Gm44062-201ENSMUST00000203312 4857 ntBASIC12.17□□□□□ -0.46
Tpm1P58771 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC12.17□□□□□ -0.46
Tpm1P58771 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tpm1P58771 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tpm1P58771 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC12.17□□□□□ -0.46
Tpm1P58771 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Tpm1P58771 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tpm1P58771 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tpm1P58771 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tpm1P58771 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tpm1P58771 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tpm1P58771 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.17□□□□□ -0.46
Tpm1P58771 Gm15329-201ENSMUST00000121408 155 ntBASIC12.17□□□□□ -0.46
Tpm1P58771 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tpm1P58771 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Tpm1P58771 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Tpm1P58771 Gm25890-201ENSMUST00000177643 165 ntBASIC12.17□□□□□ -0.46
Tpm1P58771 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.17□□□□□ -0.46
Tpm1P58771 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.17□□□□□ -0.46
Tpm1P58771 Gm22614-201ENSMUST00000178300 165 ntBASIC12.17□□□□□ -0.46
Tpm1P58771 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Tpm1P58771 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Tpm1P58771 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tpm1P58771 Gm7741-201ENSMUST00000181445 989 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms