Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Shmt1P50431 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Shmt1P50431 Gm7589-201ENSMUST00000085631 534 ntBASIC11.6□□□□□ -0.55
Shmt1P50431 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shmt1P50431 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shmt1P50431 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shmt1P50431 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shmt1P50431 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.6□□□□□ -0.55
Shmt1P50431 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shmt1P50431 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shmt1P50431 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Shmt1P50431 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shmt1P50431 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shmt1P50431 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC11.6□□□□□ -0.55
Shmt1P50431 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shmt1P50431 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shmt1P50431 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.59□□□□□ -0.55
Shmt1P50431 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Shmt1P50431 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Shmt1P50431 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Shmt1P50431 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Shmt1P50431 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Shmt1P50431 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shmt1P50431 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Shmt1P50431 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC11.59□□□□□ -0.55
Shmt1P50431 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shmt1P50431 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shmt1P50431 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shmt1P50431 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Shmt1P50431 Gm12783-201ENSMUST00000121425 397 ntBASIC11.59□□□□□ -0.55
Shmt1P50431 Mir1893-201ENSMUST00000122565 83 ntBASIC11.59□□□□□ -0.55
Shmt1P50431 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC11.59□□□□□ -0.55
Shmt1P50431 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shmt1P50431 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Shmt1P50431 Gm31274-201ENSMUST00000197356 229 ntBASIC11.59□□□□□ -0.55
Shmt1P50431 Gm17889-201ENSMUST00000198410 598 ntBASIC11.59□□□□□ -0.55
Shmt1P50431 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Shmt1P50431 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.59□□□□□ -0.55
Shmt1P50431 Gm5178-201ENSMUST00000219380 898 ntBASIC11.59□□□□□ -0.55
Shmt1P50431 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.59□□□□□ -0.55
Shmt1P50431 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC11.59□□□□□ -0.55
Shmt1P50431 BX649293.1-201ENSMUST00000227437 631 ntBASIC11.59□□□□□ -0.55
Shmt1P50431 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shmt1P50431 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shmt1P50431 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shmt1P50431 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Shmt1P50431 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shmt1P50431 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shmt1P50431 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shmt1P50431 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shmt1P50431 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Shmt1P50431 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Shmt1P50431 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shmt1P50431 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shmt1P50431 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Shmt1P50431 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.59□□□□□ -0.55
Shmt1P50431 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shmt1P50431 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Shmt1P50431 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Shmt1P50431 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.58□□□□□ -0.56
Shmt1P50431 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shmt1P50431 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.58□□□□□ -0.56
Shmt1P50431 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.58□□□□□ -0.56
Shmt1P50431 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shmt1P50431 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shmt1P50431 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shmt1P50431 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Shmt1P50431 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.58□□□□□ -0.56
Shmt1P50431 Gm22146-201ENSMUST00000157397 288 ntBASIC11.58□□□□□ -0.56
Shmt1P50431 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC11.58□□□□□ -0.56
Shmt1P50431 Ighv2-1-201ENSMUST00000170946 353 ntBASIC11.58□□□□□ -0.56
Shmt1P50431 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC11.58□□□□□ -0.56
Shmt1P50431 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.58□□□□□ -0.56
Shmt1P50431 Gm40414-201ENSMUST00000197608 481 ntBASIC11.58□□□□□ -0.56
Shmt1P50431 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC11.58□□□□□ -0.56
Shmt1P50431 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC11.58□□□□□ -0.56
Shmt1P50431 Gm18463-201ENSMUST00000207258 474 ntBASIC11.58□□□□□ -0.56
Shmt1P50431 Gm18460-201ENSMUST00000208088 464 ntBASIC11.58□□□□□ -0.56
Shmt1P50431 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Shmt1P50431 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Shmt1P50431 Gm18042-201ENSMUST00000219887 790 ntBASIC11.58□□□□□ -0.56
Shmt1P50431 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shmt1P50431 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shmt1P50431 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shmt1P50431 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shmt1P50431 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shmt1P50431 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shmt1P50431 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Shmt1P50431 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.58□□□□□ -0.56
Shmt1P50431 Gm44056-201ENSMUST00000204623 1427 ntBASIC11.58□□□□□ -0.56
Shmt1P50431 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC11.58□□□□□ -0.56
Shmt1P50431 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shmt1P50431 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.58□□□□□ -0.56
Shmt1P50431 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shmt1P50431 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shmt1P50431 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shmt1P50431 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shmt1P50431 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.57□□□□□ -0.56
Shmt1P50431 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.57□□□□□ -0.56
Shmt1P50431 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms