Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC10.23□□□□□ -0.77
Sox2P48432 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC10.23□□□□□ -0.77
Sox2P48432 Gm6714-201ENSMUST00000218677 2330 ntBASIC10.23□□□□□ -0.77
Sox2P48432 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Sox2P48432 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Sox2P48432 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC10.23□□□□□ -0.77
Sox2P48432 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC10.23□□□□□ -0.77
Sox2P48432 Gm43274-201ENSMUST00000202545 5000 ntBASIC10.23□□□□□ -0.77
Sox2P48432 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.22□□□□□ -0.77
Sox2P48432 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Sox2P48432 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sox2P48432 Gm28693-201ENSMUST00000189622 2638 ntBASIC10.22□□□□□ -0.77
Sox2P48432 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC10.22□□□□□ -0.77
Sox2P48432 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox2P48432 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Sox2P48432 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox2P48432 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sox2P48432 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Sox2P48432 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.22□□□□□ -0.77
Sox2P48432 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox2P48432 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox2P48432 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox2P48432 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Sox2P48432 Gm4294-201ENSMUST00000105169 614 ntBASIC10.22□□□□□ -0.77
Sox2P48432 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Sox2P48432 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.22□□□□□ -0.77
Sox2P48432 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.22□□□□□ -0.77
Sox2P48432 Gm15566-201ENSMUST00000121130 590 ntBASIC10.22□□□□□ -0.77
Sox2P48432 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.22□□□□□ -0.77
Sox2P48432 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sox2P48432 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox2P48432 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox2P48432 Gm24990-201ENSMUST00000157406 323 ntBASIC10.22□□□□□ -0.77
Sox2P48432 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Sox2P48432 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Sox2P48432 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Sox2P48432 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Sox2P48432 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Sox2P48432 Gm23694-201ENSMUST00000179335 110 ntBASIC10.22□□□□□ -0.77
Sox2P48432 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox2P48432 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.22□□□□□ -0.77
Sox2P48432 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.22□□□□□ -0.77
Sox2P48432 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.22□□□□□ -0.77
Sox2P48432 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.22□□□□□ -0.77
Sox2P48432 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox2P48432 AC154436.1-201ENSMUST00000227272 782 ntBASIC10.22□□□□□ -0.77
Sox2P48432 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox2P48432 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox2P48432 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox2P48432 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Sox2P48432 Gm25125-201ENSMUST00000083340 136 ntBASIC10.22□□□□□ -0.77
Sox2P48432 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox2P48432 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sox2P48432 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.22□□□□□ -0.77
Sox2P48432 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox2P48432 Gm42851-201ENSMUST00000201325 1411 ntBASIC10.22□□□□□ -0.77
Sox2P48432 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sox2P48432 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sox2P48432 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox2P48432 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox2P48432 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Sox2P48432 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sox2P48432 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Sox2P48432 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Sox2P48432 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Sox2P48432 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Sox2P48432 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sox2P48432 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Sox2P48432 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Sox2P48432 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Sox2P48432 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox2P48432 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox2P48432 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sox2P48432 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sox2P48432 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sox2P48432 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sox2P48432 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sox2P48432 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sox2P48432 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sox2P48432 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Sox2P48432 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.77
Sox2P48432 Gm10417-201ENSMUST00000194341 3522 ntBASIC10.21□□□□□ -0.77
Sox2P48432 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sox2P48432 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sox2P48432 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sox2P48432 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.21□□□□□ -0.77
Sox2P48432 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sox2P48432 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sox2P48432 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Sox2P48432 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
Sox2P48432 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.21□□□□□ -0.77
Sox2P48432 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.21□□□□□ -0.77
Sox2P48432 Gm24844-201ENSMUST00000158679 127 ntBASIC10.21□□□□□ -0.77
Sox2P48432 Mir1938-201ENSMUST00000158746 100 ntBASIC10.21□□□□□ -0.77
Sox2P48432 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms